| GenBank top hits | e value | %identity | Alignment |
|---|
| AFK13856.1 Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] | 5.6e-25 | 40.66 | Show/hide |
Query: DAYGVVLGTGGIVQATSVCKDVNLTI-ANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
+ +GV LG G V+ T +C+ V L + L + DFLPL LGN+DVILG WLE LG V +K +M F LG L GD +L RS+VSLK++++T
Subjt: DAYGVVLGTGGIVQATSVCKDVNLTI-ANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
Query: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
KE G+ +E + V G G R+ + ++ P +Q++++ F VFE LPP G+ V VRPYRYPQF
Subjt: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
|
|
| KAA0039528.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.9e-51 | 70.51 | Show/hide |
Query: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
+DAYG+VLGT GIV+A VCK+VNLTIANLSITHDFLPLPLG+ADVILG TWLEMLGK +FYYKLSEMEF LGEW+
Subjt: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
Query: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPPP
EDQGV IELS V QWG GEARE++ADYLSKLQ EIQKVLQSFSVVFE SNQLPPP
Subjt: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPPP
|
|
| XP_019105193.1 PREDICTED: uncharacterized protein LOC109135022 [Beta vulgaris subsp. vulgaris] | 3.3e-25 | 41.11 | Show/hide |
Query: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
+GV LG G V T VC+ V L + + +T DFLPL LGN+D+ILG WLE LG + +K M+F + VV L+GD SL RS++SL++++K KE
Subjt: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
Query: QGVSIELSAVVQWGV-GEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
G +EL+ + G GEA A + + +QKV+ F+ VF+ LPP G+ V VRPYRYPQF
Subjt: QGVSIELSAVVQWGV-GEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
|
|
| XP_022897442.1 uncharacterized protein LOC111411108 [Olea europaea var. sylvestris] | 7.3e-25 | 39.23 | Show/hide |
Query: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
YGV++GTG V+ +C+ V+L + L I DFLPL LG++D+ILG WL+ LG+ +K M F + + LQGD SL R+ VSLK++ K F+++
Subjt: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
Query: QGVSIELSAVVQWGVGEAREHIADYLSKLQPE--IQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
+G+ +EL + I ++ QP I ++L+ F +VF+ QLPP PGA VNVRPYRYP F
Subjt: QGVSIELSAVVQWGVGEAREHIADYLSKLQPE--IQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
|
|
| XP_031737572.1 uncharacterized protein LOC116402461 [Cucumis sativus] | 2.5e-73 | 81.87 | Show/hide |
Query: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
MDAYGVVLGTGG+V+AT VCKDVNL IANLSITH+FLPLPLG+ DVILG TWLE LGK +F YKLSEMEFS GEWVVILQGDRSLVRSQVSLKS+MKTFE
Subjt: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
Query: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
KEDQGV IELS V QWG GEAREHIA+YLSKLQPEIQKVLQSFS VFEPSNQLPP PGARA+NVR YRYPQF
Subjt: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSY7 Ty3/gypsy retrotransposon protein | 7.8e-25 | 36.87 | Show/hide |
Query: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
YGV++G+G VQ +CK + + + L+I DFLPL LGN D++LG WL+ G +K M F +G+ VIL+GD SL R ++SLK ++KT++ +D
Subjt: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
Query: QGVSIELSAVVQWGVGEAREH--IADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
QG I A+ G+ +A + + D + Q + +++ Q FS +F+ ++LPP G +N+RPYRYP
Subjt: QGVSIELSAVVQWGVGEAREH--IADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
|
|
| A0A5D3BL18 Ty3/gypsy retrotransposon protein | 7.8e-25 | 36.87 | Show/hide |
Query: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
YGV++G+G VQ +CK + + + L+I DFLPL LGN D++LG WL+ G +K M F +G+ VIL+GD SL R ++SLK ++KT++ +D
Subjt: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
Query: QGVSIELSAVVQWGVGEAREH--IADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
QG I A+ G+ +A + + D + Q + +++ Q FS +F+ ++LPP G +N+RPYRYP
Subjt: QGVSIELSAVVQWGVGEAREH--IADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
|
|
| A0A5D3CTU6 Ty3-gypsy retrotransposon protein | 2.9e-51 | 70.51 | Show/hide |
Query: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
+DAYG+VLGT GIV+A VCK+VNLTIANLSITHDFLPLPLG+ADVILG TWLEMLGK +FYYKLSEMEF LGEW+
Subjt: MDAYGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
Query: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPPP
EDQGV IELS V QWG GEARE++ADYLSKLQ EIQKVLQSFSVVFE SNQLPPP
Subjt: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPPP
|
|
| A0A5D3D378 Gypsy/ty3 element polyprotein | 7.8e-25 | 38.55 | Show/hide |
Query: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
YGV++G+G VQ +CK + + + +SI DFLPL LGN D++LG WL+ G +K M F +G+ VIL+GD SL R ++SLK ++KT++ +D
Subjt: YGVVLGTGGIVQATSVCKDVNLTIANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFEKED
Query: QGVSIELSAVVQWGVGEAREHI--ADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
QG + A+ G+ +A I D + + Q E ++ Q F VFE + LPP G +NVRPYRYP
Subjt: QGVSIELSAVVQWGVGEAREHI--ADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYP
|
|
| J3SDF5 Ty3/gypsy retrotransposon protein | 2.7e-25 | 40.66 | Show/hide |
Query: DAYGVVLGTGGIVQATSVCKDVNLTI-ANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
+ +GV LG G V+ T +C+ V L + L + DFLPL LGN+DVILG WLE LG V +K +M F LG L GD +L RS+VSLK++++T
Subjt: DAYGVVLGTGGIVQATSVCKDVNLTI-ANLSITHDFLPLPLGNADVILGFTWLEMLGKEVFYYKLSEMEFSLGEWVVILQGDRSLVRSQVSLKSIMKTFE
Query: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
KE G+ +E + V G G R+ + ++ P +Q++++ F VFE LPP G+ V VRPYRYPQF
Subjt: KEDQGVSIELSAVVQWGVGEAREHIADYLSKLQPEIQKVLQSFSVVFEPSNQLPP-----------PGARAVNVRPYRYPQF
|
|
