| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6598510.1 DNA-directed RNA polymerase I subunit RPA12, partial [Cucurbita argyrosperma subsp. sororia] | 3.5e-63 | 89.29 | Show/hide |
Query: LVTGSRPDKSSLGRKLSGNRQAPLMAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERR
L + SRPDKSSL + G P MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERR
Subjt: LVTGSRPDKSSLGRKLSGNRQAPLMAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERR
Query: RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
Subjt: RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
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| XP_004143007.1 DNA-directed RNA polymerase I subunit RPA12 isoform X1 [Cucumis sativus] | 1.8e-59 | 99.14 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECP CKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_008445334.1 PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cucumis melo] | 3.4e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKS+RSAKEI GREISYTVTAEEIRKQLGISLI EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_022144336.1 DNA-directed RNA polymerase I subunit RPA12-like [Momordica charantia] | 4.4e-58 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_023546814.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita pepo subsp. pepo] | 1.2e-58 | 98.28 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LKC4 DNA-directed RNA polymerase subunit | 8.6e-60 | 99.14 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECP CKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A1S3BBZ4 DNA-directed RNA polymerase subunit | 1.6e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKS+RSAKEI GREISYTVTAEEIRKQLGISLI EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1CTE6 DNA-directed RNA polymerase subunit | 2.1e-58 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1HDS4 DNA-directed RNA polymerase subunit | 3.6e-58 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYS GHDFLFCNLCGTMLSF STKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1KC19 DNA-directed RNA polymerase subunit | 4.7e-58 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECPLCKSRRSAK I+GREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94703 DNA-directed RNA polymerase I subunit RPA12 | 3.5e-10 | 30.63 | Show/hide |
Query: LFCNLCGTMLSFCSTKYVECPLCK----SRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
+FC+ CG +L + ++ C C+ S + A +V + S + ++ + I ++ +K + A +C KCGND F + Q+RSADEG T FY
Subjt: LFCNLCGTMLSFCSTKYVECPLCK----SRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
Query: CTKCHHQTREN
C +C ++ N
Subjt: CTKCHHQTREN
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| Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 | 9.3e-11 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q1XHV8 DNA-directed RNA polymerase I subunit RPA12 | 1.2e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q5TM50 DNA-directed RNA polymerase I subunit RPA12 | 7.1e-11 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q9P1U0 DNA-directed RNA polymerase I subunit RPA12 | 1.2e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G01210.1 DNA-directed RNA polymerase, subunit M, archaeal | 2.9e-07 | 30.7 | Show/hide |
Query: FCNLCGTMLS---------FCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
FC CG +L FCST CP + EI +++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++
Subjt: FCNLCGTMLS---------FCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
Query: TFYTCTKCHHQTRE
FY C KC RE
Subjt: TFYTCTKCHHQTRE
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| AT1G20065.1 FUNCTIONS IN: molecular_function unknown | 1.5e-16 | 61.29 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGIS
M SR D LFCNLCGTML STKY ECPLC++ R+ KEI+ + ++YTVT E+IR++LGIS
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGIS
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| AT1G20065.2 FUNCTIONS IN: molecular_function unknown | 6.0e-13 | 60.38 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAE
M SR D LFCNLCGTML STKY ECPLC++ R+ KEI+ + ++YTVT E
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAE
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| AT3G25940.1 TFIIB zinc-binding protein | 2.2e-31 | 55.93 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
M SR +FLFCNLCGTML STKY ECP CK+ R+AK+I+ +EI+YTV+AE+IR++LGISL E+ + +L K ++ CEKC + E + +RQ RSAD
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
Query: EGQTTFYTCTKCHHQTRE
EGQTT+YTC C H+ E
Subjt: EGQTTFYTCTKCHHQTRE
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| AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal | 2.9e-07 | 30.7 | Show/hide |
Query: FCNLCGTMLS---------FCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
FC CG +L FCST CP + EI +++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++
Subjt: FCNLCGTMLS---------FCSTKYVECPLCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
Query: TFYTCTKCHHQTRE
FY C KC RE
Subjt: TFYTCTKCHHQTRE
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