; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G16830 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G16830
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPseudouridine synthase
Genome locationChr2:16102964..16106669
RNA-Seq ExpressionCSPI02G16830
SyntenyCSPI02G16830
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR006224 - Pseudouridine synthase, RluC/RluD, conserved site
IPR006225 - Pseudouridine synthase, RluC/RluD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62268.1 hypothetical protein Csa_018737 [Cucumis sativus]1.2e-24699.54Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDFTEILSQLR+IGTQK QVTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

XP_008445318.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Cucumis melo]1.4e-23495.37Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS IHFFFP NRRRI SNVLR S+NFS+RC SDYDEYSEAQSERIANYAGTRLEETVD+NPGKVRLDSWIS RINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+TSTGE++SDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSI VFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA  GTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AK+AASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDF EILSQLR+IGT+KLQVTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

XP_008445320.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Cucumis melo]5.0e-23294.91Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS IHFFFP NRRRI SNVLR S+NFS+RC SDYDEYSEAQSERIANYAGTRLEETVD+NPGKVRLDSWIS RINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+TSTGE++SDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSI VFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA  GTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AK+AASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDF EILSQLR+IGT+K  VTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

XP_031736623.1 RNA pseudouridine synthase 2, chloroplastic [Cucumis sativus]3.3e-24499.77Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQK
        NIRFSCPPPTDFTEILSQLR+IGTQK
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQK

XP_038886062.1 RNA pseudouridine synthase 2, chloroplastic isoform X4 [Benincasa hispida]2.0e-21789.46Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS I  FFP NRRRI  +VLR S N STR SSDYDEY EAQSER AN+AG RLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGR+IDKVSHNVKAGD+INCTISELQPLRAEPEDIDLDIVYED HVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATS GE  SD D+
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSS+ +FSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFK HSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA+ GT NNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AK+AASRY VMEILAQGGSSLVEWRLETGRTHQIRAHAK+MGIPLLGD+VYGGTKSMAMSLLR+R SS+CH QLMQ +SSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKL
        NIRFSCPPPTDF EILSQLR+IGT+K+
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKL

TrEMBL top hitse value%identityAlignment
A0A0A0LKD7 Pseudouridine synthase6.0e-24799.54Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDFTEILSQLR+IGTQK QVTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

A0A1S3BCE4 Pseudouridine synthase6.8e-23595.37Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS IHFFFP NRRRI SNVLR S+NFS+RC SDYDEYSEAQSERIANYAGTRLEETVD+NPGKVRLDSWIS RINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+TSTGE++SDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSI VFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA  GTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AK+AASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDF EILSQLR+IGT+KLQVTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

A0A1S3BD56 Pseudouridine synthase2.4e-23294.91Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS IHFFFP NRRRI SNVLR S+NFS+RC SDYDEYSEAQSERIANYAGTRLEETVD+NPGKVRLDSWIS RINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+TSTGE++SDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSI VFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA  GTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
        AK+AASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGK

Query:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS
        NIRFSCPPPTDF EILSQLR+IGT+K  VTKS
Subjt:  NIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS

A0A5A7VHA3 Pseudouridine synthase4.0e-21195.66Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCSARTIQASPS IHFFFP NRRRI SNVLR S+NFS+RC SDYDEYSEAQSERIANYAGTRLEETVD+NPGKVRLDSWIS RINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+TSTGE++SDSDV
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH
        SDDEFSSI VFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRMTA  GTKNNPH
Subjt:  SDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPH

Query:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLG
        AK+AASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLG
Subjt:  AKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLG

A0A6J1CMS3 Pseudouridine synthase1.9e-20585.75Show/hide
Query:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR
        MISVCS R IQA+PS I  FFP NR RI SNV RI++N STRC SDYDE  EA SERI NYAG RLEE VDVN GK+RLDSWISCRINGISRARVQSSIR
Subjt:  MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIR

Query:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV
        AGLV+VNGRVIDKVSHN+KAGD+INCTISELQPLRA+PEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATS GE  SD D+
Subjt:  AGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDV

Query:  SDDEFSSIGVF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNP
        SDDEFSS  +  SR SEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PICRDPNNRIRM+A+  T  NP
Subjt:  SDDEFSSIGVF-SRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNP

Query:  HAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTG
        HAKYAASRY V+EILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMA+SLLRTR SS+CH QLMQLVS+LERPCLHALTLGF+HP+TG
Subjt:  HAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTG

Query:  KNIRFSCPPPTDFTEILSQLRKIGTQKL
        +NIRFSCPPPTDF +I SQL +IGT+K+
Subjt:  KNIRFSCPPPTDFTEILSQLRKIGTQKL

SwissProt top hitse value%identityAlignment
O50310 Uncharacterized RNA pseudouridine synthase Cpar_07233.1e-5136.87Show/hide
Query:  TVDVNPGK--VRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPA
        T+DV+  +  +R+D +++ ++  ++R +VQ++I  G V VNG+ + K ++ VK+ D I+ T          PEDI + I+YED+ ++V++K A MVVHPA
Subjt:  TVDVNPGK--VRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPA

Query:  PGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCG
         GN TGTL NAIL+H               D+D  D             +  +RPGIVHRLDK TSGL+++AK+  +   L+ QF    +E+VY ++  G
Subjt:  PGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCG

Query:  VPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRA
        VP + +G I+  I R   NR  M   +        K+A + Y V+E L  G  SL++  L TGRTHQIR H +++G  +LGDE YGG         RT  
Subjt:  VPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRA

Query:  SSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRKIGT
         S        L+  + R  LHA TL F  P TG+ + FS P P D   +L ++R + T
Subjt:  SSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRKIGT

P50513 Ribosomal large subunit pseudouridine synthase D1.3e-5439.65Show/hide
Query:  RLDSWISCRINGISRARVQSSIRAGLVS-VNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN
        RLD  ++  I  +SR R+++ I +G VS   G ++   +  +K+ D     I   +P   EP+DI L+IV+EDEH+LVVNKPA MVVHPA GN   TLVN
Subjt:  RLDSWISCRINGISRARVQSSIRAGLVS-VNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN

Query:  AILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE
        A+L HC+                    + S IG          RPGIVHR+DK TSGLLVVAK + +HA L+AQF  HSI R Y ++  G  PS  G ++
Subjt:  AILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE

Query:  MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQ
         P+ R   NR +M  +    ++   K A + Y ++  L    +SL+E RLETGRTHQ+R H   +G  LLGD VYG +K    +LL++ A          
Subjt:  MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQ

Query:  LVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQL
             +R  LHA  LGF+HP +GK + F    P D   +   L
Subjt:  LVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQL

Q3ECD0 RNA pseudouridine synthase 2, chloroplastic7.7e-14362.47Show/hide
Query:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS
        S+ +A++++   SP     I F F P      SN +R SS      +    E    +     N AG R+EE VD   GK+RLDSWIS RING+SRARVQS
Subjt:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS

Query:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD
        SIR GLV+VNGRV+DKVSHNVK+GD +NCTISELQPL+AE EDI LDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  S  E + D
Subjt:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD

Query:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG
        SD    SDDE  +    S    A +RPGIVHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRM AI G
Subjt:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG

Query:  TKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFV
              A++AASRY V+E  A GGS+LVEWRLETGRTHQIRAHAKYMG+PLLGDEVYGGTKSMA+SLL+ R S +   ++++L+S ++RPCLHA+ LGF 
Subjt:  TKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFV

Query:  HPHTGKNIRFSCPPPTDFTEILSQLRKIG
        HP TG+ ++FSCPPP+D  EI+  LR+ G
Subjt:  HPHTGKNIRFSCPPPTDFTEILSQLRKIG

Q45480 Uncharacterized RNA pseudouridine synthase YlyB1.8e-5438.44Show/hide
Query:  RLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNA
        R+D +++   N  SR +VQ  ++ G V VNG  + K ++ ++ GD +  T+ E + L    E +DLDI YED+ VLVVNKP  MVVHPAPG+ TGTLVN 
Subjt:  RLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNA

Query:  ILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEM
        ++ HC+                    + S I          +RPGIVHR+DK TSGLL+VAK++ +H  L  Q    ++ R Y ++  G+     G I+ 
Subjt:  ILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEM

Query:  PICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQL
        PI RD  +R  MT     KN      A + ++V+E       +LVE +LETGRTHQIR H KY+G PL GD  YG  K++           + +GQ    
Subjt:  PICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQL

Query:  VSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRKIG
                LHA  LGF HP TG+ + F  P P D  E++  LRK G
Subjt:  VSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRKIG

Q5Z8P2 RNA pseudouridine synthase 2, chloroplastic2.2e-13760.37Show/hide
Query:  ARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRC-SSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRI--NGISRARVQSSIRAGL
        A T  ASP  I        RR      R       RC ++D +  + A S R   + GTRLEE V    G+ R+D+WIS R+   G+SRAR+Q+SIRAGL
Subjt:  ARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRC-SSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRI--NGISRARVQSSIRAGL

Query:  VSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSL---PMVATSTGENE-----
        V VNGR + KVSH VK GD+++CT+ ELQPLRAEPEDI LDIVYED+H+LVVNKPAHMVVHPAPGNA GTLVNAIL+HC +     +A ++ ++E     
Subjt:  VSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSL---PMVATSTGENE-----

Query:  -SDSDVSD-DEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAID
          D DV D D+F++  V S V EA +RPGIVHRLDKGTSGLLVVAKDEHSHA L+ QFK H+I RVYISLTCG P   +GRIE+PI RDPNNRIRM A  
Subjt:  -SDSDVSD-DEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAID

Query:  GTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGF
        G+  + +A++AASRY V E+ A GGS+LVEWRLETGRTHQIRAHAKY+GIPLLGDE YGGTKSMA+SLLR R  S  H  L  ++S ++RPCLHA  LGF
Subjt:  GTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGF

Query:  VHPHTGKNIRFSCPPPTDFTEILSQLRKI
         HPH+GK + FSCPPP DFTE+L++L ++
Subjt:  VHPHTGKNIRFSCPPPTDFTEILSQLRKI

Arabidopsis top hitse value%identityAlignment
AT1G76050.1 Pseudouridine synthase family protein1.2e-9361.34Show/hide
Query:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS
        S+ +A++++   SP     I F F P      SN +R SS      +    E    +     N AG R+EE VD   GK+RLDSWIS RING+SRARVQS
Subjt:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS

Query:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD
        SIR GLV+VNGRV+DKVSHNVK+GD +NCTISELQPL+AE EDI LDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  S  E + D
Subjt:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD

Query:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG
        SD    SDDE  +    S    A +RPGIVHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRM AI G
Subjt:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG

Query:  TKNNPHAKYAASR
              A++AASR
Subjt:  TKNNPHAKYAASR

AT1G76050.2 Pseudouridine synthase family protein5.5e-14462.47Show/hide
Query:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS
        S+ +A++++   SP     I F F P      SN +R SS      +    E    +     N AG R+EE VD   GK+RLDSWIS RING+SRARVQS
Subjt:  SVCSARTIQASPSP-----IHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQS

Query:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD
        SIR GLV+VNGRV+DKVSHNVK+GD +NCTISELQPL+AE EDI LDIVYED+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  S  E + D
Subjt:  SIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESD

Query:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG
        SD    SDDE  +    S    A +RPGIVHRLDKGT+GLLVVAKDEHSHAHL+ QFK H+IERVY+SLT GVP    GRIE+PI RD +NRIRM AI G
Subjt:  SD---VSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDG

Query:  TKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFV
              A++AASRY V+E  A GGS+LVEWRLETGRTHQIRAHAKYMG+PLLGDEVYGGTKSMA+SLL+ R S +   ++++L+S ++RPCLHA+ LGF 
Subjt:  TKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFV

Query:  HPHTGKNIRFSCPPPTDFTEILSQLRKIG
        HP TG+ ++FSCPPP+D  EI+  LR+ G
Subjt:  HPHTGKNIRFSCPPPTDFTEILSQLRKIG

AT3G52260.1 Pseudouridine synthase family protein3.8e-1225.19Show/hide
Query:  IRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDS
        I+ G + ++G V+   +  +++G  +   +    P +       L+++YED+ ++ +NKP+ + V P                  L  +    G+N+S  
Subjt:  IRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDS

Query:  DVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--
                   + SR S  P+    VHRL +GTSG+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI  
Subjt:  DVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--

Query:  CRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPL
         R P       A      +P  K A S+  V+E   +   SLV+  +++GR HQIR H  YMG PL
Subjt:  CRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPL

AT3G52260.2 Pseudouridine synthase family protein1.4e-1425.74Show/hide
Query:  IRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDS
        I+ G + ++G V+   +  +++G  +   +    P +       L+++YED+ ++ +NKP+ + V P                  L  +    G+N+S  
Subjt:  IRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDS

Query:  DVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--
                   + SR S  P+    VHRL +GTSG+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI  
Subjt:  DVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--

Query:  CRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY
         R P       A      +P  K A S+  V+E   +   SLV+  +++GR HQIR H  YMG PL+GD +Y
Subjt:  CRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY

AT3G52260.3 Pseudouridine synthase family protein3.8e-1224.18Show/hide
Query:  VSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDD
        + ++G V+   +  +++G  +   +    P +       L+++YED+ ++ +NKP+ + V P                  L  +    G+N+S       
Subjt:  VSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDD

Query:  EFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--CRDPN
              + SR S  P+    VHRL +GTSG+L+ AK + +   L+A F +                   + ++Y +L  G+       I+ PI   R P 
Subjt:  EFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEMPI--CRDPN

Query:  NRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM
              A      +P  K A S+  V+E   +   SLV+  +++GR HQIR H  YMG PL+   ++ G++ +
Subjt:  NRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCGTTTGCTCCGCTAGAACAATTCAAGCTTCACCTTCTCCTATTCACTTCTTTTTCCCTCCAAATCGTAGAAGAATCGGTTCGAATGTTCTTCGAATTTCCTC
CAATTTCTCCACTAGATGCTCCTCCGATTACGATGAATATAGTGAAGCTCAATCCGAACGGATAGCCAATTACGCCGGAACCAGACTGGAAGAGACCGTGGACGTCAATC
CCGGTAAAGTTCGTCTCGATTCTTGGATTTCTTGCCGCATTAACGGCATCAGTAGGGCTCGAGTTCAGTCCAGTATTAGAGCGGGATTAGTTTCAGTTAATGGCCGAGTT
ATCGATAAGGTTTCTCACAATGTAAAAGCTGGGGATGTGATCAATTGTACCATATCCGAGTTGCAACCATTGAGAGCTGAACCTGAAGATATTGATTTGGATATAGTTTA
TGAAGATGAACATGTTTTAGTCGTAAACAAACCTGCTCACATGGTTGTTCATCCAGCACCTGGAAATGCGACAGGAACACTAGTAAATGCCATTCTTAACCACTGCAGTC
TCCCGATGGTTGCAACATCAACTGGGGAAAATGAGTCGGATTCAGATGTTTCCGATGATGAGTTCAGTTCAATTGGAGTTTTTTCTAGAGTTTCTGAGGCGCCTATTCGT
CCTGGTATTGTGCATAGGTTAGATAAAGGAACTAGTGGATTGCTTGTTGTTGCCAAGGATGAACATTCCCATGCTCACTTATCTGCTCAATTTAAGCAACATTCTATTGA
GAGAGTTTATATTAGTCTCACATGTGGAGTTCCACCTTCAACTGCTGGGCGTATTGAGATGCCAATTTGCCGTGATCCAAACAATCGTATCCGCATGACTGCAATAGATG
GAACAAAAAACAATCCACATGCAAAGTACGCTGCTAGTAGATACAATGTTATGGAAATTTTAGCCCAAGGAGGTTCTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGC
ACACATCAGATACGTGCACACGCGAAGTATATGGGAATACCATTACTTGGAGACGAGGTCTATGGAGGTACCAAGAGCATGGCCATGTCGCTGCTTCGAACTAGAGCATC
ATCTAATTGTCACGGCCAGCTCATGCAGCTTGTTTCTTCATTAGAGAGGCCCTGTCTTCATGCTCTGACTCTTGGGTTTGTACATCCTCACACAGGGAAGAACATACGTT
TTTCATGCCCACCCCCAACAGATTTTACTGAAATTTTGAGTCAGCTTCGCAAAATTGGCACACAAAAGTTGCAGGTTACCAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
CCCAATTTTCCCGGTAAGAAAACAGACAGCCGATTAGTGAAAACCCAGAAACGAAACTATCGAAGACGGGAGAATGATTTCCGTTTGCTCCGCTAGAACAATTCAAGCTT
CACCTTCTCCTATTCACTTCTTTTTCCCTCCAAATCGTAGAAGAATCGGTTCGAATGTTCTTCGAATTTCCTCCAATTTCTCCACTAGATGCTCCTCCGATTACGATGAA
TATAGTGAAGCTCAATCCGAACGGATAGCCAATTACGCCGGAACCAGACTGGAAGAGACCGTGGACGTCAATCCCGGTAAAGTTCGTCTCGATTCTTGGATTTCTTGCCG
CATTAACGGCATCAGTAGGGCTCGAGTTCAGTCCAGTATTAGAGCGGGATTAGTTTCAGTTAATGGCCGAGTTATCGATAAGGTTTCTCACAATGTAAAAGCTGGGGATG
TGATCAATTGTACCATATCCGAGTTGCAACCATTGAGAGCTGAACCTGAAGATATTGATTTGGATATAGTTTATGAAGATGAACATGTTTTAGTCGTAAACAAACCTGCT
CACATGGTTGTTCATCCAGCACCTGGAAATGCGACAGGAACACTAGTAAATGCCATTCTTAACCACTGCAGTCTCCCGATGGTTGCAACATCAACTGGGGAAAATGAGTC
GGATTCAGATGTTTCCGATGATGAGTTCAGTTCAATTGGAGTTTTTTCTAGAGTTTCTGAGGCGCCTATTCGTCCTGGTATTGTGCATAGGTTAGATAAAGGAACTAGTG
GATTGCTTGTTGTTGCCAAGGATGAACATTCCCATGCTCACTTATCTGCTCAATTTAAGCAACATTCTATTGAGAGAGTTTATATTAGTCTCACATGTGGAGTTCCACCT
TCAACTGCTGGGCGTATTGAGATGCCAATTTGCCGTGATCCAAACAATCGTATCCGCATGACTGCAATAGATGGAACAAAAAACAATCCACATGCAAAGTACGCTGCTAG
TAGATACAATGTTATGGAAATTTTAGCCCAAGGAGGTTCTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGCACACATCAGATACGTGCACACGCGAAGTATATGGGAA
TACCATTACTTGGAGACGAGGTCTATGGAGGTACCAAGAGCATGGCCATGTCGCTGCTTCGAACTAGAGCATCATCTAATTGTCACGGCCAGCTCATGCAGCTTGTTTCT
TCATTAGAGAGGCCCTGTCTTCATGCTCTGACTCTTGGGTTTGTACATCCTCACACAGGGAAGAACATACGTTTTTCATGCCCACCCCCAACAGATTTTACTGAAATTTT
GAGTCAGCTTCGCAAAATTGGCACACAAAAGTTGCAGGTTACCAAATCTTAGCTGGGAGCCTCCAGTATCTGGCAAGTAGACTCGTCAAATTGCTCGAAAATGAGACATC
AAGAAGG
Protein sequenceShow/hide protein sequence
MISVCSARTIQASPSPIHFFFPPNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRV
IDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFSRVSEAPIR
PGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGR
THQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLRKIGTQKLQVTKS