; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G16840 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G16840
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionComplex 1 LYR protein
Genome locationChr2:16108660..16111283
RNA-Seq ExpressionCSPI02G16840
SyntenyCSPI02G16840
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016900070.1 PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]3.2e-7592.41Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRLVGKYLNLSSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        VLR+NARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRDQL
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]1.7e-6885.99Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MT+RLVGK LNL SI K+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEK F+DEDD+LITQR LT+TRREALSLYRDI+RATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ
        VLRENARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]8.4e-6883.44Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        M+MRLV K + LS+  KNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEK FDD++++LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ
        VLR+NARKEFEDARFE+DPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRD+
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]5.1e-8198.73Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRLVGKYLNLSSI KNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        VLRENARKEFEDAR ESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]5.6e-7291.03Show/hide
Query:  MRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
        MRLVGK LNL SI KNFLTC+KIGFHPRVLHNGPDTV ELLDRHVVKKEK FDDE+D+LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVL
Subjt:  MRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVL

Query:  RENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        R+NARKEFEDAR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ GRDQL
Subjt:  RENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein2.5e-8198.73Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRLVGKYLNLSSI KNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        VLRENARKEFEDAR ESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

A0A1S4DWJ1 uncharacterized protein LOC1034885691.5e-7592.41Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRLVGKYLNLSSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        VLR+NARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRDQL
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

A0A5A7VCD6 Complex 1 LYR protein1.5e-7592.41Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MTMRLVGKYLNLSSI KNFL CSKIGFHPRVLHNGPDTVEELLDRHVVKKEK  DD+ DKLITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL
        VLR+NARKEFEDARFESDPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRDQL
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL

A0A6J1CRY1 uncharacterized protein LOC1110140198.2e-6985.99Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        MT+RLVGK LNL SI K+FL C+KIGFHPRVLHNGPDT++ELLDRHVVKKEK F+DEDD+LITQR LT+TRREALSLYRDI+RATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ
        VLRENARKEFE+AR+ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ G DQ
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623394.1e-6883.44Show/hide
Query:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD
        M+MRLV K + LS+  KNFL C+K+GFHPR+LHNGPDT++ELLDRHVVKKEK FDD++++LITQRRLT+TRREALSLYRDILRATRFFMWPDSRGVLWRD
Subjt:  MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRD

Query:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ
        VLR+NARKEFEDARFE+DPE+VTRLLIGGRDAVQSALDKLAEKQR+EIDKKQ GRD+
Subjt:  VLRENARKEFEDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein5.1e-4774.6Show/hide
Query:  RVLHNGPDTVEELLDRHVVKKEK-FFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIG
        R LH GPDTVEELL+RH+ KKEK   D ++ + + +RRLT+TRREALSLYRDILRATRFF W DSRG LWRDVLRENARKEFE ARFE+DPE++TRLLIG
Subjt:  RVLHNGPDTVEELLDRHVVKKEK-FFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARFESDPEMVTRLLIG

Query:  GRDAVQSALDKLAEKQREEIDKKQGG
        G DAV SALDKLAEKQRE I+K++ G
Subjt:  GRDAVQSALDKLAEKQREEIDKKQGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGAGGTTGGTAGGAAAATATCTTAATCTGTCGTCAATTCGTAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGCCCTGA
CACTGTAGAAGAACTCTTAGACAGACATGTGGTTAAGAAAGAAAAGTTCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGTCTCACCACCACTCGACGTGAGG
CTCTAAGCCTCTATAGAGATATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCACGGAAGGAGTTT
GAGGATGCACGCTTTGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGA
GATTGATAAGAAGCAAGGTGGTCGAGATCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTACCCTCTGGTTTCTTCATTTCCAGTTCTCGCGAACTTCCCCCTTCATCAATCTCTCTCCTCGAAATCCGCTTCTCTTCTGTTCCTTCCACTTTCTCCGATCAATC
CCTTCCCCCAATTTTCTTTTGCTTCGCTGCTTCAAGGTATTATCATATCTATGGTGATTTTGTTTCGACTCCACTTGGCCTAGAGAGTTCATTGAGGTTGCTGTCCACAC
ACACAGACCAGATCCTAAGTAAATCACTTGGCATTGTCCCTTTGAGCGCCAAAGGAAACCTTTAAATATCCGGCTGACCTATGCAGTGGTGCAAAAATGACCATGAGGTT
GGTAGGAAAATATCTTAATCTGTCGTCAATTCGTAAGAATTTTCTGACCTGCAGTAAAATTGGTTTCCACCCTCGAGTTTTGCATAATGGCCCTGACACTGTAGAAGAAC
TCTTAGACAGACATGTGGTTAAGAAAGAAAAGTTCTTTGATGATGAAGATGATAAATTGATAACACAGCGACGTCTCACCACCACTCGACGTGAGGCTCTAAGCCTCTAT
AGAGATATTCTACGGGCAACTCGATTCTTTATGTGGCCAGATTCTAGAGGTGTCTTGTGGCGAGATGTTCTCAGGGAGAATGCACGGAAGGAGTTTGAGGATGCACGCTT
TGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGTGATGCAGTGCAGTCGGCTCTTGACAAGCTTGCTGAGAAACAGAGGGAGGAGATTGATAAGAAGC
AAGGTGGTCGAGATCAACTCTGATTTATAATATGGATGACGATTGGGCTACATCAAAAAGGAATTGGATCAGTTGCTAACATATGAAGGTAAAAAGGAACGGCAATAATT
GAATTAATTTTTTTCTTTCATTGGGTTGCTTGAAGTCTTTTAGACACCTGGATATTTAGTGTGCTTCACTAGACTTGACTCACAATGCTAGGGGTTAGGGGTTGATAAGA
TATAAAATTGATGTTTACTTAACCGTGAGATTCACAAATACGTTGGGTCAAACAATGTAAGTAGTAAGGACATGATTACAACTGCAGTCATAAGTAGTAAGGACATGATT
ACAACTGCAGTCATATTTATTTGGGGATCTGTCTATTGTTTGAAAGTTCATCAGCTTGATGCTTGTATTTTGTTGGAAATTGTGTTCCTACCACCCATCTTCTTTTCACC
ATCGCAAGAGCAAGAGGGAGAGCTAAATCTTGAAGAAGACAAAAGTGATCATAATAACAACAAAAAGTTTAGGAGCTTAAAAGATTAGAGAGCAAATAGTCAAAAGTGAA
CAAAATGTATATGACTGCGAAACTTGTAACTAAGAAATTGTAAGTAAGTGGACCAAGGCGGTGGAAGTTGCGAATTTCTACCAATTTCTGGTACACACACCTTTGTACTT
TTTTTTAGTTCACAAAATTCAAAGAATCTACTTTACCTACTAATTTTCGGC
Protein sequenceShow/hide protein sequence
MTMRLVGKYLNLSSIRKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDKLITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEF
EDARFESDPEMVTRLLIGGRDAVQSALDKLAEKQREEIDKKQGGRDQL