; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G17020 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G17020
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiontype 2 DNA topoisomerase 6 subunit B-like isoform X4
Genome locationChr2:16258136..16263573
RNA-Seq ExpressionCSPI02G17020
SyntenyCSPI02G17020
Gene Ontology termsGO:0042138 - meiotic DNA double-strand break formation (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR034566 - Type 2 DNA topoisomerase 6 subunit B-like, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142982.2 type 2 DNA topoisomerase 6 subunit B-like isoform X1 [Cucumis sativus]2.3e-20497.04Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT   +ISDPEISCYQLNLKENVTTRK
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK

Query:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
        PIRLPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
Subjt:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS

Query:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
        SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
Subjt:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA

Query:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        LLKWEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

XP_011649475.1 type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Cucumis sativus]1.4e-20196.5Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT   +ISDPEISCYQLNLKENVTTRK
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK

Query:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
        PIRLPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILK  NIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
Subjt:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS

Query:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
        SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
Subjt:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA

Query:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        LLKWEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

XP_011649477.1 type 2 DNA topoisomerase 6 subunit B-like isoform X3 [Cucumis sativus]1.4e-20698.1Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR

Query:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM
        LPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM
Subjt:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM

Query:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK
        CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK
Subjt:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK

Query:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        WEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

XP_011649478.1 type 2 DNA topoisomerase 6 subunit B-like isoform X4 [Cucumis sativus]4.3e-21197.38Show/hide
Query:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQL
        MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT   +ISDPEISCYQL
Subjt:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQL

Query:  NLKENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLG
        NLKENVTTRKPIRLPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLG
Subjt:  NLKENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLG

Query:  LEDFVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTL
        LEDFVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTL
Subjt:  LEDFVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTL

Query:  ECAINQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        ECAINQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  ECAINQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

XP_011649479.1 type 2 DNA topoisomerase 6 subunit B-like isoform X5 [Cucumis sativus]8.8e-20498.09Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT   +ISDPEISCYQLNLKENVTTRK
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTT---NISDPEISCYQLNLKENVTTRK

Query:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
        PIRLPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS
Subjt:  PIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS

Query:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
        SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA
Subjt:  SSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHA

Query:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK
        LLKWEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK
Subjt:  LLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK

TrEMBL top hitse value%identityAlignment
A0A0A0LMM9 Uncharacterized protein1.3e-21398.41Show/hide
Query:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLK
        MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLK
Subjt:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLK

Query:  ENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLED
        ENVTTRKPIRLPSNIKH VKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLED
Subjt:  ENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLED

Query:  FVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
        FVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
Subjt:  FVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA

Query:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATP+VQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

A0A1S3BAV4 type 2 DNA topoisomerase 6 subunit B-like isoform X14.9e-19292.12Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHG+CIQEFQDLKCPVEGILAETWDGIVYVRTTNISD EISCYQLNLKENV TRKP+ 
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR

Query:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM
        LPSNIKHDVKFSGTEVCL VSESVDVLLAEINC FHQILILKVPNIAMEVVADGQDTSGS NDAVFLENLFSGSSFTASTLD LKLG ED+VL HGSSS 
Subjt:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM

Query:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK
        CNSCFPNRDELKSGGGMVCEDKHK+TKLVVEAAVVI EISN T NCFGAGCSDTKVL FKDF PC+ISEAFLKALT IDWKRHGLTLECAINQRRHALLK
Subjt:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK

Query:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        WE+TPLSFHIHIVVHYY KLVANATPLVQQTR DKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

A0A1S4DVL3 type 2 DNA topoisomerase 6 subunit B-like isoform X25.0e-18991.3Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVR  IS+TGHG+CIQEFQDLKCPVEGILAETWDGIVYVRTTNISD EISCYQLNLKENV TRKP+ 
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR

Query:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM
        LPSNIKHDVKFSGTEVCL VSESVDVLLAEINC FHQILILKVPNIAMEVVADGQDTSGS NDAVFLENLFSGSSFTASTLD LKLG ED+VL HGSSS 
Subjt:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM

Query:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK
        CNSCFPNRDELKSGGGMVCEDKHK+TKLVVEAAVVI EISN T NCFGAGCSDTKVL FKDF PC+ISEAFLKALT IDWKRHGLTLECAINQRRHALLK
Subjt:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK

Query:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        WE+TPLSFHIHIVVHYY KLVANATPLVQQTR DKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

A0A1S4DVL6 type 2 DNA topoisomerase 6 subunit B-like isoform X31.9e-18389.13Show/hide
Query:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
        L LISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHG+CIQEFQDLKCPVEGILAETWDGIVYVRTTNISD EISCYQLNLKENV TRKP+ 
Subjt:  LHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR

Query:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM
        LPSNIKHDVKFSGTEVCL VSESVDVLLAEINC FHQILILKVPNIAMEVVADGQDTSGS NDAVFLENLFSGSSFTASTLD LKLG ED+VL HGSSS 
Subjt:  LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSM

Query:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK
        CNSCFPNRDELKSGGGMVCEDKHK+TKLVVEAAVVI EISN T NCFGAGCSDTKVL FKDF PC+ISEAFLKALT IDWKRHGLTLECAINQRRHALLK
Subjt:  CNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLK

Query:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        WE+TPLSFHIHIVVHYY           Q+TR DKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  WEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

A0A1S4DVN5 type 2 DNA topoisomerase 6 subunit B-like isoform X49.2e-19992.59Show/hide
Query:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLK
        MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHG+CIQEFQDLKCPVEGILAETWDGIVYVRTTNISD EISCYQLNLK
Subjt:  MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLK

Query:  ENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLED
        ENV TRKP+ LPSNIKHDVKFSGTEVCL VSESVDVLLAEINC FHQILILKVPNIAMEVVADGQDTSGS NDAVFLENLFSGSSFTASTLD LKLG ED
Subjt:  ENVTTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLED

Query:  FVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
        +VL HGSSS CNSCFPNRDELKSGGGMVCEDKHK+TKLVVEAAVVI EISN T NCFGAGCSDTKVL FKDF PC+ISEAFLKALT IDWKRHGLTLECA
Subjt:  FVLRHGSSSMCNSCFPNRDELKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA

Query:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
        INQRRHALLKWE+TPLSFHIHIVVHYY KLVANATPLVQQTR DKKLISKAVQLALEDFKNKHAGFLLSVDNLK+  +
Subjt:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

SwissProt top hitse value%identityAlignment
Q5Q0E6 Type 2 DNA topoisomerase 6 subunit B-like1.7e-7241.27Show/hide
Query:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV
        A +  L L LISSA +RC  +E LCRLSVLL +S   DPP+  ISI+DTG G  ++EFQ+L+CP E   A+ WDG++ V+TT  +D E+  Y +NL E +
Subjt:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV

Query:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL
          ++  R PS  K+  KFSGTEV L V  S+DVL+A I   F +I++L++ N+ ++++     + G+    VF  N      FTAS L+ LK GLED+VL
Subjt:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL

Query:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
        RH +   +MC+ CF +R+ LK G G VC EDKHK     +E  +VI ++   T +C  +    T+VL F +F P  +    L AL  IDWK++GL L   
Subjt:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA

Query:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
         +Q  H  L+W+  P    I I +H+YH    N  P  Q+      L+ K ++ AL++ K KH GFLLS  + K+  Y
Subjt:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

Arabidopsis top hitse value%identityAlignment
AT1G60460.1 unknown protein1.2e-7341.27Show/hide
Query:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV
        A +  L L LISSA +RC  +E LCRLSVLL +S   DPP+  ISI+DTG G  ++EFQ+L+CP E   A+ WDG++ V+TT  +D E+  Y +NL E +
Subjt:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV

Query:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL
          ++  R PS  K+  KFSGTEV L V  S+DVL+A I   F +I++L++ N+ ++++     + G+    VF  N      FTAS L+ LK GLED+VL
Subjt:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL

Query:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
        RH +   +MC+ CF +R+ LK G G VC EDKHK     +E  +VI ++   T +C  +    T+VL F +F P  +    L AL  IDWK++GL L   
Subjt:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA

Query:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
         +Q  H  L+W+  P    I I +H+YH    N  P  Q+      L+ K ++ AL++ K KH GFLLS  + K+  Y
Subjt:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

AT1G60460.2 unknown protein6.1e-7040.61Show/hide
Query:  RCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIRLPSNIKHDV
        +C  +E LCRLSVLL +S   DPP+  ISI+DTG G  ++EFQ+L+CP E   A+ WDG++ V+TT  +D E+  Y +NL E +  ++  R PS  K+  
Subjt:  RCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIRLPSNIKHDV

Query:  KFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS--SSMCNSCFPN
        KFSGTEV L V  S+DVL+A I   F +I++L++ N+ ++++     + G+    VF  N      FTAS L+ LK GLED+VLRH +   +MC+ CF +
Subjt:  KFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGS--SSMCNSCFPN

Query:  RDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLKWEQTPL
        R+ LK G G VC EDKHK     +E  +VI ++   T +C  +    T+VL F +F P  +    L AL  IDWK++GL L    +Q  H  L+W+  P 
Subjt:  RDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLKWEQTPL

Query:  SFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
           I I +H+YH    N  P  Q+      L+ K ++ AL++ K KH GFLLS  + K+  Y
Subjt:  SFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY

AT1G60460.3 unknown protein1.2e-7341.27Show/hide
Query:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV
        A +  L L LISSA +RC  +E LCRLSVLL +S   DPP+  ISI+DTG G  ++EFQ+L+CP E   A+ WDG++ V+TT  +D E+  Y +NL E +
Subjt:  ASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENV

Query:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL
          ++  R PS  K+  KFSGTEV L V  S+DVL+A I   F +I++L++ N+ ++++     + G+    VF  N      FTAS L+ LK GLED+VL
Subjt:  TTRKPIRLPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVL

Query:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA
        RH +   +MC+ CF +R+ LK G G VC EDKHK     +E  +VI ++   T +C  +    T+VL F +F P  +    L AL  IDWK++GL L   
Subjt:  RHGS--SSMCNSCFPNRDELKSGGGMVC-EDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECA

Query:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY
         +Q  H  L+W+  P    I I +H+YH    N  P  Q+      L+ K ++ AL++ K KH GFLLS  + K+  Y
Subjt:  INQRRHALLKWEQTPLSFHIHIVVHYYHKLVANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGCTTCTCTTCAAGATCTCTACCTACATCTAATTTCTTCGGCAATACGGAGGTGCATCTGTTCCGAACGACTTTGCAGACTCTCAGTTCTTCTTCAACGCTC
TCCCGCTTCCGATCCTCCACTTGTTCGTATTTCCATTTCAGATACCGGCCATGGAAACTGCATACAGGAGTTTCAGGATTTGAAGTGCCCCGTCGAAGGTATCCTTGCCG
AAACGTGGGATGGAATTGTTTACGTGAGAACGACCAATATTTCTGATCCTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTCGG
CTACCATCAAACATTAAGCATGATGTGAAATTCAGTGGAACCGAAGTGTGTTTGTTTGTTTCTGAAAGTGTTGATGTTTTGCTGGCGGAGATCAACTGCTTATTTCATCA
GATCCTTATTCTAAAGGTCCCAAATATTGCAATGGAAGTTGTGGCCGATGGCCAGGATACCTCAGGGTCACTTAATGATGCTGTTTTCCTAGAAAACTTGTTCTCGGGTT
CCTCTTTCACAGCCTCAACCCTTGATCTTTTGAAATTGGGCCTTGAGGATTTTGTATTAAGGCATGGATCTAGTTCGATGTGCAACTCTTGTTTCCCTAACAGGGATGAA
CTGAAGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAATTACCAAACTGGTAGTGGAGGCAGCAGTTGTGATTGGTGAAATATCAAATCTGACCAATAATTGCTT
CGGAGCAGGATGCTCTGATACAAAGGTTCTCTGTTTTAAAGATTTTGCTCCTTGTTCGATCTCGGAGGCATTTCTAAAGGCATTAACATTCATTGACTGGAAACGTCATG
GATTGACTTTGGAATGTGCTATCAATCAAAGAAGGCATGCACTATTAAAGTGGGAACAGACGCCCTTATCTTTTCATATTCATATTGTTGTCCACTACTATCATAAGCTT
GTTGCCAATGCCACACCATTGGTGCAGCAGACTCGATTCGATAAAAAACTCATAAGCAAAGCAGTTCAACTTGCACTGGAAGACTTCAAGAATAAACATGCGGGATTTCT
TCTCAGTGTTGATAACCTCAAGGTAGATCTCTATTTCATTGTCAGGAGTGCATAG
mRNA sequenceShow/hide mRNA sequence
TGGAAACCGTCGTGCATGGTTTTATTTACGAGAGTGCGGGAGTTGGTTTTAGCGTTCTCTCAAATCTGCAATCATGGAGTTTGCTTCTCTTCAAGATCTCTACCTACATC
TAATTTCTTCGGCAATACGGAGGTGCATCTGTTCCGAACGACTTTGCAGACTCTCAGTTCTTCTTCAACGCTCTCCCGCTTCCGATCCTCCACTTGTTCGTATTTCCATT
TCAGATACCGGCCATGGAAACTGCATACAGGAGTTTCAGGATTTGAAGTGCCCCGTCGAAGGTATCCTTGCCGAAACGTGGGATGGAATTGTTTACGTGAGAACGACCAA
TATTTCTGATCCTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTCGGCTACCATCAAACATTAAGCATGATGTGAAATTCAGTG
GAACCGAAGTGTGTTTGTTTGTTTCTGAAAGTGTTGATGTTTTGCTGGCGGAGATCAACTGCTTATTTCATCAGATCCTTATTCTAAAGGTCCCAAATATTGCAATGGAA
GTTGTGGCCGATGGCCAGGATACCTCAGGGTCACTTAATGATGCTGTTTTCCTAGAAAACTTGTTCTCGGGTTCCTCTTTCACAGCCTCAACCCTTGATCTTTTGAAATT
GGGCCTTGAGGATTTTGTATTAAGGCATGGATCTAGTTCGATGTGCAACTCTTGTTTCCCTAACAGGGATGAACTGAAGAGTGGGGGTGGAATGGTTTGTGAAGACAAGC
ATAAAATTACCAAACTGGTAGTGGAGGCAGCAGTTGTGATTGGTGAAATATCAAATCTGACCAATAATTGCTTCGGAGCAGGATGCTCTGATACAAAGGTTCTCTGTTTT
AAAGATTTTGCTCCTTGTTCGATCTCGGAGGCATTTCTAAAGGCATTAACATTCATTGACTGGAAACGTCATGGATTGACTTTGGAATGTGCTATCAATCAAAGAAGGCA
TGCACTATTAAAGTGGGAACAGACGCCCTTATCTTTTCATATTCATATTGTTGTCCACTACTATCATAAGCTTGTTGCCAATGCCACACCATTGGTGCAGCAGACTCGAT
TCGATAAAAAACTCATAAGCAAAGCAGTTCAACTTGCACTGGAAGACTTCAAGAATAAACATGCGGGATTTCTTCTCAGTGTTGATAACCTCAAGGTAGATCTCTATTTC
ATTGTCAGGAGTGCATAGACTAAATTAATCATGAAGCCGG
Protein sequenceShow/hide protein sequence
MEFASLQDLYLHLISSAIRRCICSERLCRLSVLLQRSPASDPPLVRISISDTGHGNCIQEFQDLKCPVEGILAETWDGIVYVRTTNISDPEISCYQLNLKENVTTRKPIR
LPSNIKHDVKFSGTEVCLFVSESVDVLLAEINCLFHQILILKVPNIAMEVVADGQDTSGSLNDAVFLENLFSGSSFTASTLDLLKLGLEDFVLRHGSSSMCNSCFPNRDE
LKSGGGMVCEDKHKITKLVVEAAVVIGEISNLTNNCFGAGCSDTKVLCFKDFAPCSISEAFLKALTFIDWKRHGLTLECAINQRRHALLKWEQTPLSFHIHIVVHYYHKL
VANATPLVQQTRFDKKLISKAVQLALEDFKNKHAGFLLSVDNLKVDLYFIVRSA