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CSPI02G17290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G17290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr2:16406611..16406961
RNA-Seq ExpressionCSPI02G17290
SyntenyCSPI02G17290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061064.1 hypothetical protein E6C27_scaffold501G002020 [Cucumis melo var. makuwa]1.4e-3279.25Show/hide
Query:  MMVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFAST
        MMVISEDE  RCL +K+KPKVAD  EM   EQPTTPTSEEFRIG RVHNYL CPPPPRKPKSLPGPITMS TT+  +NNNN AKYFT+YSEL A FFAST
Subjt:  MMVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFAST

Query:  SPFPST
        S FPST
Subjt:  SPFPST
KGN62317.1 hypothetical protein Csa_018773 [Cucumis sativus]1.1e-5699.13Show/hide
Query:  MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFASTSPFPS
        MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVH NNNNNGAKYFTSYSELQAFFFASTSPFPS
Subjt:  MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFASTSPFPS

Query:  TQQNHSSFYRSATQH
        TQQNHSSFYRSATQH
Subjt:  TQQNHSSFYRSATQH
TrEMBL top hitse value%identityAlignment
A0A0A0LNC7 Uncharacterized protein5.3e-5799.13Show/hide
Query:  MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFASTSPFPS
        MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVH NNNNNGAKYFTSYSELQAFFFASTSPFPS
Subjt:  MVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFASTSPFPS

Query:  TQQNHSSFYRSATQH
        TQQNHSSFYRSATQH
Subjt:  TQQNHSSFYRSATQH
A0A5A7V162 Uncharacterized protein6.9e-3379.25Show/hide
Query:  MMVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFAST
        MMVISEDE  RCL +K+KPKVAD  EM   EQPTTPTSEEFRIG RVHNYL CPPPPRKPKSLPGPITMS TT+  +NNNN AKYFT+YSEL A FFAST
Subjt:  MMVISEDERCRCLLMKVKPKVADLEEM---EQPTTPTSEEFRIG-RVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFAST

Query:  SPFPST
        S FPST
Subjt:  SPFPST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTGATATCTGAAGATGAGCGCTGTCGCTGTTTGTTAATGAAAGTGAAGCCAAAGGTGGCGGATCTGGAGGAGATGGAACAACCAACTACTCCAACCAGTGAAGA
GTTCAGAATTGGGCGAGTGCATAATTATTTGGCATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTTTTACTACTGTCCACAATAATA
ATAATAATAATGGCGCCAAATACTTCACTTCTTACTCGGAACTCCAGGCCTTCTTCTTCGCCTCCACTTCACCGTTTCCCTCTACCCAACAAAATCATTCTTCCTTTTAC
CGCTCTGCCACCCAACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGTGATATCTGAAGATGAGCGCTGTCGCTGTTTGTTAATGAAAGTGAAGCCAAAGGTGGCGGATCTGGAGGAGATGGAACAACCAACTACTCCAACCAGTGAAGA
GTTCAGAATTGGGCGAGTGCATAATTATTTGGCATGCCCTCCACCGCCGAGGAAGCCTAAATCACTCCCCGGCCCCATCACCATGAGTTTTACTACTGTCCACAATAATA
ATAATAATAATGGCGCCAAATACTTCACTTCTTACTCGGAACTCCAGGCCTTCTTCTTCGCCTCCACTTCACCGTTTCCCTCTACCCAACAAAATCATTCTTCCTTTTAC
CGCTCTGCCACCCAACACTAA
Protein sequenceShow/hide protein sequence
MMVISEDERCRCLLMKVKPKVADLEEMEQPTTPTSEEFRIGRVHNYLACPPPPRKPKSLPGPITMSFTTVHNNNNNNGAKYFTSYSELQAFFFASTSPFPSTQQNHSSFY
RSATQH