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CSPI02G17880 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G17880
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr2:16725887..16727182
RNA-Seq ExpressionCSPI02G17880
SyntenyCSPI02G17880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585750.1 hypothetical protein SDJN03_18483, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1450Show/hide
Query:  KRIERTNQSRFKR--EEDPERGDGVDGGFGVAARKDFLSP--CGEEERFLIIYMVVLLRFSQGTAICT--APSPVTIQSNHELSFIVPVDVSCRLSRRRL
        KR+E TNQSRF R  EE    G       G+   ++   P  CG  ERF  ++   L      T  C     SPV+   NHELS IVPVDVSCR SRRR 
Subjt:  KRIERTNQSRFKR--EEDPERGDGVDGGFGVAARKDFLSP--CGEEERFLIIYMVVLLRFSQGTAICT--APSPVTIQSNHELSFIVPVDVSCRLSRRRL

Query:  ACEFARILTGYSQAALSI
        ACEFA+IL+GYSQAALS+
Subjt:  ACEFARILTGYSQAALSI
KGN62379.1 hypothetical protein Csa_018717 [Cucumis sativus]5.0e-84100Show/hide
Query:  MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV
        MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV
Subjt:  MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV

Query:  VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
        VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
Subjt:  VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
TrEMBL top hitse value%identityAlignment
A0A0A0LN05 Uncharacterized protein2.4e-84100Show/hide
Query:  MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV
        MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV
Subjt:  MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMV

Query:  VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
        VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
Subjt:  VLLRFSQGTAICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCGGAACGAATGACTACACAACCGACACGTGGACAACCGAAGTTGGGGGCCCAGGGAAGGTCTGACTATAGCCGATTCTCCAACGCATCACGTTTCCGAGA
AGAAATAGGGAAAAACAAATTTTTAAATCCCATTAAGAAACGCATCGAAAGAACAAACCAATCCAGATTCAAGAGAGAGGAAGATCCAGAGAGAGGCGACGGAGTAGACG
GGGGATTCGGCGTAGCCGCTAGGAAAGATTTCCTTTCCCCTTGCGGTGAAGAAGAACGGTTTCTGATTATATATATGGTAGTTTTACTAAGATTTTCACAAGGAACTGCG
ATTTGTACTGCCCCTTCTCCCGTCACCATTCAGTCAAATCACGAGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCTTTCAAGAAGAAGATTGGCTTGTGAATT
TGCCCGAATCCTTACTGGGTATTCTCAGGCCGCCTTGTCCATCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTCGGAACGAATGACTACACAACCGACACGTGGACAACCGAAGTTGGGGGCCCAGGGAAGGTCTGACTATAGCCGATTCTCCAACGCATCACGTTTCCGAGA
AGAAATAGGGAAAAACAAATTTTTAAATCCCATTAAGAAACGCATCGAAAGAACAAACCAATCCAGATTCAAGAGAGAGGAAGATCCAGAGAGAGGCGACGGAGTAGACG
GGGGATTCGGCGTAGCCGCTAGGAAAGATTTCCTTTCCCCTTGCGGTGAAGAAGAACGGTTTCTGATTATATATATGGTAGTTTTACTAAGATTTTCACAAGGAACTGCG
ATTTGTACTGCCCCTTCTCCCGTCACCATTCAGTCAAATCACGAGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCTTTCAAGAAGAAGATTGGCTTGTGAATT
TGCCCGAATCCTTACTGGGTATTCTCAGGCCGCCTTGTCCATCTATTGA
Protein sequenceShow/hide protein sequence
MAISERMTTQPTRGQPKLGAQGRSDYSRFSNASRFREEIGKNKFLNPIKKRIERTNQSRFKREEDPERGDGVDGGFGVAARKDFLSPCGEEERFLIIYMVVLLRFSQGTA
ICTAPSPVTIQSNHELSFIVPVDVSCRLSRRRLACEFARILTGYSQAALSIY