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CSPI02G17980 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G17980
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAT5G11810-like protein
Genome locationChr2:16768758..16769011
RNA-Seq ExpressionCSPI02G17980
SyntenyCSPI02G17980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060997.1 Recoverin [Cucumis melo var. makuwa]1.3e-07100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
XP_004142926.1 uncharacterized protein LOC101217985 isoform X1 [Cucumis sativus]1.3e-07100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
XP_008444464.1 PREDICTED: uncharacterized protein LOC103487783 isoform X1 [Cucumis melo]1.3e-07100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
XP_008444465.1 PREDICTED: uncharacterized protein LOC103487783 isoform X2 [Cucumis melo]1.3e-07100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
XP_011649532.1 uncharacterized protein LOC101217985 isoform X2 [Cucumis sativus]1.3e-07100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
TrEMBL top hitse value%identityAlignment
A0A0A0LKE8 Uncharacterized protein6.3e-08100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
A0A1S3BB60 uncharacterized protein LOC103487783 isoform X16.3e-08100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
A0A1S3BB82 uncharacterized protein LOC103487783 isoform X26.3e-08100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
A0A5A7V2A7 Recoverin6.3e-08100Show/hide
Query:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
        HGSNLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  HGSNLVIPADRFIHEVAFKLWKAPKYGA
A0A6P3ZVW7 uncharacterized protein LOC1074201002.4e-0783.33Show/hide
Query:  LTHGSNLVIPADRFIHEVAFKLWKAPKYGA
        + HG NLVIPADRF+HE+AFKLWKAPKYGA
Subjt:  LTHGSNLVIPADRFIHEVAFKLWKAPKYGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11810.1 unknown protein1.9e-09100Show/hide
Query:  NLVIPADRFIHEVAFKLWKAPKYGA
        NLVIPADRFIHEVAFKLWKAPKYGA
Subjt:  NLVIPADRFIHEVAFKLWKAPKYGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTCATGTCTTGCTTCCCCAACCCCGGGGTTCCTCATGTCTTGATGTGATTAAAAATGTAAAGCTTCTACTCTTCAAATCTGGCTTTCCTGGCCTGTACTTGAA
AGGATACCTCTTTGATTTGACGCATGGTAGCAACCTAGTAATACCAGCAGACAGATTTATACATGAGGTGGCGTTTAAGCTTTGGAAGGCCCCCAAGTATGGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTCATGTCTTGCTTCCCCAACCCCGGGGTTCCTCATGTCTTGATGTGATTAAAAATGTAAAGCTTCTACTCTTCAAATCTGGCTTTCCTGGCCTGTACTTGAA
AGGATACCTCTTTGATTTGACGCATGGTAGCAACCTAGTAATACCAGCAGACAGATTTATACATGAGGTGGCGTTTAAGCTTTGGAAGGCCCCCAAGTATGGAGCTTGA
Protein sequenceShow/hide protein sequence
MIAHVLLPQPRGSSCLDVIKNVKLLLFKSGFPGLYLKGYLFDLTHGSNLVIPADRFIHEVAFKLWKAPKYGA