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CSPI02G18040 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G18040
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionHomeobox domain-containing protein
Genome locationChr2:16809912..16810169
RNA-Seq ExpressionCSPI02G18040
SyntenyCSPI02G18040
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060995.1 hypothetical protein E6C27_scaffold501G001300 [Cucumis melo var. makuwa]2.7e-41100Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG

KAF3975862.1 hypothetical protein CMV_000902 [Castanea mollissima]5.8e-1270.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK
        MVLRRPG NRS NRENPDILIMM A  QI+RG  +DKG+  E++GMGPLKP T+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK

KAG6674396.1 hypothetical protein I3842_15G039000 [Carya illinoinensis]2.6e-1253.75Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLL
        M LRRPG NRS NRENPDILI+MIA +QI+RG  +DKGD  +R+GMGPLK A +          G +P  +  PPP   L
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLL

KAG7029268.1 hypothetical protein SDJN02_07606, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2476.83Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSP-SLSCSPPPGFLLC
        MVLRR GRNRSFNRENPDILIMMIAVDQIIRG EQDKGDGTERKGMGPLKP TKSEW        LSP SL  SP P    C
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSP-SLSCSPPPGFLLC

KGN62652.2 hypothetical protein Csa_018750 [Cucumis sativus]4.7e-2294.64Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSE
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSE

TrEMBL top hitse value%identityAlignment
A0A0A0LN23 Uncharacterized protein2.3e-2294.64Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSE
        MVLRRPGRNR+FNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK +
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSE

A0A0R0JC99 Uncharacterized protein2.2e-0970.37Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK
        M LR P  NRS NRENPDIL MMIA  QIIRG E DK D  ERK MGP+KPAT+
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATK

A0A5A7V591 Uncharacterized protein1.3e-41100Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG
        MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG

A0A6A4PQS0 Putative transcription factor Homeodomain-TALE-BEL family1.0e-0963.64Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKSEWFLHPKSYG
        M LR    NRS NRENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+      PKS G
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKSEWFLHPKSYG

A0A6A5PA14 Homeobox domain-containing protein1.0e-0963.64Show/hide
Query:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKSEWFLHPKSYG
        M LR    NRS NRENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT+      PKS G
Subjt:  MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTER-KGMGPLKPATKSEWFLHPKSYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTTGTGAGCAGGACAA
AGGAGATGGCACAGAGAGGAAGGGGATGGGCCCTTTAAAGCCTGCAACAAAGAGTGAGTGGTTTCTGCATCCCAAGAGCTATGGTCTCTCTCCCTCTCTTTCTTGCTCTC
CACCCCCTGGTTTTCTCTTGTGCGGCTGA
mRNA sequenceShow/hide mRNA sequence
GTCTGAAAAATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTTGTGA
GCAGGACAAAGGAGATGGCACAGAGAGGAAGGGGATGGGCCCTTTAAAGCCTGCAACAAAGAGTGAGTGGTTTCTGCATCCCAAGAGCTATGGTCTCTCTCCCTCTCTTT
CTTGCTCTCCACCCCCTGGTTTTCTCTTGTGCGGCTGA
Protein sequenceShow/hide protein sequence
MVLRRPGRNRSFNRENPDILIMMIAVDQIIRGCEQDKGDGTERKGMGPLKPATKSEWFLHPKSYGLSPSLSCSPPPGFLLCG