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CSPI02G18070 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G18070
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPollen-specific protein SF21 isoform X1
Genome locationChr2:16817312..16817507
RNA-Seq ExpressionCSPI02G18070
SyntenyCSPI02G18070
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060993.1 pollen-specific protein SF21 isoform X1 [Cucumis melo var. makuwa]6.7e-0469.05Show/hide
Query:  MVKPT---------RGAREVSVNVRWKGNAASVTRLDSDDSK
        MV PT         +GAREVSVNVRWKGNAASVTRLDS DS+
Subjt:  MVKPT---------RGAREVSVNVRWKGNAASVTRLDSDDSK
KAE8652055.1 hypothetical protein Csa_018648, partial [Cucumis sativus]2.1e-1897.96Show/hide
Query:  GAREVSVNVRWKGNAASVTRLDSDDSKGRVEIFPPNNVVVELLKRFGGI
        GAREVSVNVRWKGNAASVTR+DSDDSKGRVEIFPPNNVVVELLKRFGGI
Subjt:  GAREVSVNVRWKGNAASVTRLDSDDSKGRVEIFPPNNVVVELLKRFGGI
TrEMBL top hitse value%identityAlignment
A0A0A0LNM1 Uncharacterized protein2.6e-2298.18Show/hide
Query:  MVKPTRGAREVSVNVRWKGNAASVTRLDSDDSKGRVEIFPPNNVVVELLKRFGGI
        MVKPTRGAREVSVNVRWKGNAASVTR+DSDDSKGRVEIFPPNNVVVELLKRFGGI
Subjt:  MVKPTRGAREVSVNVRWKGNAASVTRLDSDDSKGRVEIFPPNNVVVELLKRFGGI
A0A5A7UYD9 Pollen-specific protein SF21 isoform X13.2e-0469.05Show/hide
Query:  MVKPT---------RGAREVSVNVRWKGNAASVTRLDSDDSK
        MV PT         +GAREVSVNVRWKGNAASVTRLDS DS+
Subjt:  MVKPT---------RGAREVSVNVRWKGNAASVTRLDSDDSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAACCAACCAGGGGCGCTCGTGAGGTTTCTGTCAATGTGCGATGGAAGGGGAACGCGGCGTCGGTGACTCGTCTTGACTCGGACGATTCGAAGGGACGAGTTGA
AATTTTTCCCCCAAATAATGTAGTGGTGGAATTGTTGAAGAGATTTGGTGGTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAACCAACCAGGGGCGCTCGTGAGGTTTCTGTCAATGTGCGATGGAAGGGGAACGCGGCGTCGGTGACTCGTCTTGACTCGGACGATTCGAAGGGACGAGTTGA
AATTTTTCCCCCAAATAATGTAGTGGTGGAATTGTTGAAGAGATTTGGTGGTATATAA
Protein sequenceShow/hide protein sequence
MVKPTRGAREVSVNVRWKGNAASVTRLDSDDSKGRVEIFPPNNVVVELLKRFGGI