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CSPI02G18130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G18130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionArabinogalactan peptide
Genome locationChr2:16858294..16859334
RNA-Seq ExpressionCSPI02G18130
SyntenyCSPI02G18130
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0949.21Show/hide
Query:  EKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHY--LFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPASPA
        EKG  P+   +        + F S+ L  Y F  S     +  SLLS    L+P P    +      L   SL+ALIALI A++SVAAQEAPAPSPASPA
Subjt:  EKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHY--LFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPASPA

Query:  TSIAPSAVSACLAAFLALAFGSTLRI
        +SIAPS VSAC A F+AL  GSTLRI
Subjt:  TSIAPSAVSACLAAFLALAFGSTLRI

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0554.41Show/hide
Query:  LFYPMAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR
        +F  MAA+SK S +AL+A++F + SVA   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  LFYPMAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1266.67Show/hide
Query:  SPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI
        SP+S        +   MA +S+ SL+ALIA++FA++SVAA EAPAPSPASPATSIAPS VSAC+AAF+ALAFGSTLRI
Subjt:  SPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0554.41Show/hide
Query:  LFYPMAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR
        +F  MAA+SK S +AL+A++F + SVA   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  LFYPMAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]3.7e-58100Show/hide
Query:  MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS
        MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS
Subjt:  MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS

Query:  PATSIAPSAVSACLAAFLALAFGSTLRI
        PATSIAPSAVSACLAAFLALAFGSTLRI
Subjt:  PATSIAPSAVSACLAAFLALAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein1.8e-58100Show/hide
Query:  MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS
        MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS
Subjt:  MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPAS

Query:  PATSIAPSAVSACLAAFLALAFGSTLRI
        PATSIAPSAVSACLAAFLALAFGSTLRI
Subjt:  PATSIAPSAVSACLAAFLALAFGSTLRI

A0A2P5DTQ4 Arabinogalactan peptide3.4e-0455.38Show/hide
Query:  AALSKVSLLALIALIFALSSVA----AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI
        A+ S  SL+ L+A+I  + SV     A EAPAPSPASPA++I+PS +SACLAA +AL FGS +R+
Subjt:  AALSKVSLLALIALIFALSSVA----AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide7.5e-0456.72Show/hide
Query:  MAAL-SKVSLLALIALIFALSSVA----AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI
        MAA  S  SL+ L+A+I  + SV     A EAPAPSPASPA++I+PS +SACLAA +AL FGS +R+
Subjt:  MAAL-SKVSLLALIALIFALSSVA----AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI

A0A2Z6NC77 Uncharacterized protein5.7e-0459.02Show/hide
Query:  ALSKVSLLALIALIFALSSVA-AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI
        A + + LLA +A+IF++ S+A A +APAPSPASPATS++PS V+  +AA  ALAFGS LRI
Subjt:  ALSKVSLLALIALIFALSSVA-AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI

Q96504 CRG166.1e-0659.38Show/hide
Query:  MAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR
        MAA+SKVS +AL+A++FA+ SVA   + E+PAP PASPA S+ PS   AC+ AFLAL FGS L+
Subjt:  MAALSKVSLLALIALIFALSSVA---AQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 158.7e-0550Show/hide
Query:  ALSKVSLLALIALIFALSSVAAQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI
        A+SK S++ L+ +I ++ + A  EAPAPSP S +++I+ S VSA +AA  AL FGS LRI
Subjt:  ALSKVSLLALIALIFALSSVAAQEAPAPSPASPATSIAPSAVSACLAAFLALAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTGTGGAAAAGGGAACCACACCCATATATGAGCTGTCTTTCAACCATTCGCCAGCTTGCACCTCCCCGTTTCTCTCTATATATCTCTCCTTCTACTATTTCCC
TTTCTCATTTCCCAATCAAACGGTTCTCTCCTCTCTCCTCTCTCCCGCCTCAACCCTAACCCCCCGCCCCCATTACCTCTTTTACCCAATGGCCGCCCTCTCCAAAGTTT
CTCTCCTCGCTCTCATTGCCCTCATCTTCGCCCTTTCCTCCGTCGCCGCTCAGGAGGCTCCGGCTCCCAGTCCGGCCTCCCCTGCCACCTCCATTGCTCCTTCGGCCGTC
TCCGCTTGCCTTGCTGCTTTCCTTGCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
TGGCTAAAATGTTGTGCGGTGGAAAGAGAATGCATATATTCCCCGTCGATGCTCTTTGTGGAAAAGGGAACCACACCCATATATGAGCTGTCTTTCAACCATTCGCCAGC
TTGCACCTCCCCGTTTCTCTCTATATATCTCTCCTTCTACTATTTCCCTTTCTCATTTCCCAATCAAACGGTTCTCTCCTCTCTCCTCTCTCCCGCCTCAACCCTAACCC
CCCGCCCCCATTACCTCTTTTACCCAATGGCCGCCCTCTCCAAAGTTTCTCTCCTCGCTCTCATTGCCCTCATCTTCGCCCTTTCCTCCGTCGCCGCTCAGGAGGCTCCG
GCTCCCAGTCCGGCCTCCCCTGCCACCTCCATTGCTCCTTCGGCCGTCTCCGCTTGCCTTGCTGCTTTCCTTGCTCTCGCCTTCGGATCTACTCTCAGGATCTGAGCTAC
CGGCCTTCGGATGTGGTGATTGATTTTGCCATGGACTCTTCCATGTATTTGTGATGGTCTGCTTTTCCTTTTTCTTTTTCTTTTCTCTCTTCAACTAAAACCTTGCGCCG
CGGAGGAATTTGTTTTAGATGTTTTTCTAAGGGACTTTAATTTCTACACGTTTGGTACAGACGACCTCTTTTGTTTACACATTCTTATATATAGAATGCAGGTTGTGTTG
GTTTGTTCACGATTGTGCTATATTTTGTTGGTTATGATTAGTAAATAAATTGTTTCGTTCTTTTTAAATACTCTCTTCTTCTTTACTCTTTCATGCATTCATTCATACGA
ACACACTCGCTTATTATATCTAACTGCAACAATTTCTTTGAGATTCTTCGCTTAGCCAAAACAATTTGGTAATTCTCACTGTAATTGATTGATTAATTTCTTCTTGAAGA
GAGAGAGAGAGAGAAAAAAAAAACCCCCATCAGAAATCATTTTGTGTACTACCGAATTAAGTTGAGGATTATTAAATTGTGGAATTCCAAGATTTGTAAGGCATATTTAA
TATTTGAAATCTGGACCAACAGAAGTCCAATTGAAGTAGAATTTGTGGGGC
Protein sequenceShow/hide protein sequence
MLFVEKGTTPIYELSFNHSPACTSPFLSIYLSFYYFPFSFPNQTVLSSLLSPASTLTPRPHYLFYPMAALSKVSLLALIALIFALSSVAAQEAPAPSPASPATSIAPSAV
SACLAAFLALAFGSTLRI