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CSPI02G19130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCalmodulin
Genome locationChr2:17484739..17485242
RNA-Seq ExpressionCSPI02G19130
SyntenyCSPI02G19130
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.2e-4297.83Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDG+LTKEELKQAFEYLGSRF NFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3686.81Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRF +FRVEEALRAADT+GDG ISM EMGKLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3380.22Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRF +FRV+EALRAADTNGDG ISMDEM KLIKY K RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-3584.62Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRF +FRVEEALRAAD +GDG ISM EM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KGN62765.2 hypothetical protein Csa_022396 [Cucumis sativus]1.8e-38100Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIK
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIK
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIK

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein3.3e-1757.83Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKY
        MG S    +K      +E ++A VFKNHD+DGDG LTKEELK AF+YLG +F  FRV +AL AAD N D VIS +EM KLI Y
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKY

A0A0A0LRB6 Uncharacterized protein6.3e-45100Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

A0A2N9FYQ0 Uncharacterized protein4.2e-1749.43Show/hide
Query:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        K  ++KR  +PF+EEQL N+FK+HD DGDG L+++E+K+AF+YLGSR+  +R  +A+  AD + DG I  +E+ KL++YA    YTI
Subjt:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein5.9e-4397.83Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDG+LTKEELKQAFEYLGSRF NFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

A0A7N2KRS3 Uncharacterized protein3.5e-1954.02Show/hide
Query:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        K+  +KR  VPF+E+QL N+FK+HD DGDG L+++ELK AF+YLGSR+  +R ++ALR AD N DG I+ DE+ KL++YA    YT+
Subjt:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

SwissProt top hitse value%identityAlignment
P02599 Calmodulin1.7e-0736.92Show/hide
Query:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE++   FK  D+DG+G+++  EL+     LG +  N  V+E +R AD +GDG ++ DE  K++
Subjt:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

P05933 Calmodulin2.7e-0841.54Show/hide
Query:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE++   FK  D+DG+G++T EEL      LG R     V + +R ADT+GDGVI+ +E  ++I
Subjt:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

P24044 Calmodulin2.7e-0840Show/hide
Query:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE+L   F+  DRDGDG+++ +EL+     LG +  N  V+E +R AD +GDG I+ +E  K++
Subjt:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

P62203 Calmodulin2.7e-0840Show/hide
Query:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE+L   F+  DRDGDG+++ +EL+     LG +  N  V+E +R AD +GDG I+ +E  K++
Subjt:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

Q8X187 Calmodulin1.3e-0738.46Show/hide
Query:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        SEE++   FK  D+DG+G+++  EL+     LG +  +  V+E +R AD +GDG I+ DE  K++
Subjt:  SEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family2.1e-0839.71Show/hide
Query:  VPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        V  + EQL  +FK+ DRDG+G ++  EL  A   +G       + E ++ ADTNGDGVIS  E   ++
Subjt:  VPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

AT3G25600.1 Calcium-binding EF-hand family protein1.0e-0738.24Show/hide
Query:  VPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI
        V  ++EQL  VF++ DRDG+G +T  EL  +   +G       + E +  AD+NGDGVIS +E   ++
Subjt:  VPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLI

AT4G03290.1 EF hand calcium-binding protein family2.3e-0736.51Show/hide
Query:  QLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIK
        +L  VF+  D+DGDG +T +EL ++F+ LG       + + ++  D NGDG + ++E G+L K
Subjt:  QLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIK

AT4G04695.1 calcium-dependent protein kinase 313.0e-0737.97Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQ---LANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDE
        M   K    K +    SEE+   L  +F N D D  G +T EELK     LGS      VE+ + AAD +G+G I +DE
Subjt:  MGNSKSKTYKRVLVPFSEEQ---LANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDE

AT4G04700.1 calcium-dependent protein kinase 273.0e-0739.47Show/hide
Query:  YKRVLVPF-----SEEQ---LANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDE
        +K+V++ F     SEE+   L  +F N D D  G++T EELK     LGS      VE+ + AAD +G+G I +DE
Subjt:  YKRVLVPF-----SEEQ---LANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTCCAAAAGCAAAACGTACAAACGAGTTCTAGTTCCATTCTCAGAGGAGCAACTGGCCAACGTTTTCAAGAACCATGACCGAGACGGGGATGGGCATCTGAC
GAAGGAGGAGTTGAAGCAAGCCTTCGAATATCTCGGCTCACGCTTCTGCAACTTCCGGGTAGAAGAAGCCCTACGTGCCGCCGATACCAACGGGGACGGTGTCATCAGCA
TGGATGAGATGGGGAAGCTAATTAAGTATGCCAAAACTCGTAAATACACTATTAGTTAA
mRNA sequenceShow/hide mRNA sequence
GACTAGCACATTCAATATTAGTTAACAGGGATGCTTTCCCTCACTATAAAAGCACATTAAAAAGCCTAGTTTTCAAGCCCAACAAAAAACAAATTAAAAGATATATGTGT
ATATATATACATCAAATCTTATTTCCTTTCCTCGTCATCTATTACGGCTTCTTCTTTCTTCTCTTGGATGGGGAACTCCAAAAGCAAAACGTACAAACGAGTTCTAGTTC
CATTCTCAGAGGAGCAACTGGCCAACGTTTTCAAGAACCATGACCGAGACGGGGATGGGCATCTGACGAAGGAGGAGTTGAAGCAAGCCTTCGAATATCTCGGCTCACGC
TTCTGCAACTTCCGGGTAGAAGAAGCCCTACGTGCCGCCGATACCAACGGGGACGGTGTCATCAGCATGGATGAGATGGGGAAGCTAATTAAGTATGCCAAAACTCGTAA
ATACACTATTAGTTAAAAAGTAAATGTATGTTAGCTATATCAACTTCAGTTGTTCTTGTTCACC
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS