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CSPI02G19140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCalmodulin
Genome locationChr2:17488895..17489488
RNA-Seq ExpressionCSPI02G19140
SyntenyCSPI02G19140
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060898.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.4e-3283.91Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS
        MGTSN  IFK F ASLTEFEVAKVF N+D+DGDGRLTKEELKSAFK LGYKFT  RVHQALHAAD+NCDDVISFEE+SKLI+YTA S
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS

KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.2e-1757.83Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY
        MG S    +K      +E ++A VFKNHD+DGDG LTKEELK AF+YLG +F+ FRV +AL AAD N D VIS +EM KLI Y
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1654.76Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYT
        MG S    +K     LTE ++A +FK+HD+DGDG+LTKEELK AF YLG +F++FR  +AL AAD + D  I+  EMSKLI YT
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYT

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1653.57Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYT
        MG +    +K      TE ++A +FK+HD+DGDG+L+KEELK AF YLG +F++FRV +AL AAD N D  IS +EM+KLI YT
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYT

KGN62765.2 hypothetical protein Csa_022396 [Cucumis sativus]7.5e-4298.85Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS
        MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTA S
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein3.6e-4298.85Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS
        MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTA S
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS

A0A0A0LRB6 Uncharacterized protein1.8e-1757.83Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY
        MG S    +K      +E ++A VFKNHD+DGDG LTKEELK AF+YLG +F  FRV +AL AAD N D VIS +EM KLI Y
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY

A0A5A7V027 Putative Calcium-binding EF-hand family protein6.8e-3383.91Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS
        MGTSN  IFK F ASLTEFEVAKVF N+D+DGDGRLTKEELKSAFK LGYKFT  RVHQALHAAD+NCDDVISFEE+SKLI+YTA S
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS

A0A5A7V219 Putative calcium-binding protein CML102.3e-1253.57Show/hide
Query:  TSNGLIFKCFP---ASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY
        +SN L F C     +SL+E ++A +FK HD D D +LTKEEL  AF YLG ++T  RV  AL A D N D VIS +EMSKLI+Y
Subjt:  TSNGLIFKCFP---ASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.1e-1757.83Show/hide
Query:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY
        MG S    +K      +E ++A VFKNHD+DGDG LTKEELK AF+YLG +F+ FRV +AL AAD N D VIS +EM KLI Y
Subjt:  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMY

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 52.6e-0535.82Show/hide
Query:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTAD
        E+ +VF+  DK+GDGR+TKEEL  + + LG       + Q +H  D N D  +  +E   L     D
Subjt:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTAD

P05933 Calmodulin2.6e-0540.62Show/hide
Query:  EFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLI
        E EV + FK  DKDG+G +T EEL      LG + +   V   +  AD + D VI++EE S++I
Subjt:  EFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLI

Q8RZB5 Probable calcium-binding protein CML104.4e-0535.29Show/hide
Query:  PASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL
        PA   E E+ +VF+  D +GDGR+++ EL + F+ LG+  T   + + +  AD + D  IS +E + L
Subjt:  PASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL

Q9C9U8 Probable calcium-binding protein CML262.6e-0534.38Show/hide
Query:  TEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL
        T+ E+ KVF   D +GDG+++  EL + FK +G  +T   +++ L   D +CD  I+ EE + +
Subjt:  TEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL

Q9ZR02 Calmodulin-like protein 63.4e-0539.39Show/hide
Query:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAAD---DNCDDVISFEEMSKLIM
        E+ +VF+  DKDGDG++T +EL  +FK LG       + Q +   D   D C D+  F E+ K IM
Subjt:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAAD---DNCDDVISFEEMSKLIM

Arabidopsis top hitse value%identityAlignment
AT1G73630.1 EF hand calcium-binding protein family1.8e-0634.38Show/hide
Query:  TEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL
        T+ E+ KVF   D +GDG+++  EL + FK +G  +T   +++ L   D +CD  I+ EE + +
Subjt:  TEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKL

AT2G43290.1 Calcium-binding EF-hand family protein1.8e-0635.82Show/hide
Query:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTAD
        E+ +VF+  DK+GDGR+TKEEL  + + LG       + Q +H  D N D  +  +E   L     D
Subjt:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTAD

AT3G25600.1 Calcium-binding EF-hand family protein3.2e-0631.43Show/hide
Query:  LTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTA
        + + ++ +VF++ D+DG+G +T  EL  +   +G+  T   + + +  AD N D VISF E S ++  +A
Subjt:  LTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTA

AT3G51920.1 calmodulin 92.0e-0534.92Show/hide
Query:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIM
        E+ +VF+  D+DGDG +++ EL    K +G K T       +  AD + D  +SF E SK+++
Subjt:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIM

AT4G03290.1 EF hand calcium-binding protein family2.4e-0639.39Show/hide
Query:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAAD---DNCDDVISFEEMSKLIM
        E+ +VF+  DKDGDG++T +EL  +FK LG       + Q +   D   D C D+  F E+ K IM
Subjt:  EVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAAD---DNCDDVISFEEMSKLIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACCTCCAACGGCTTGATTTTTAAGTGTTTTCCAGCGTCGTTGACGGAGTTTGAGGTGGCCAAAGTTTTCAAGAACCACGACAAGGATGGAGATGGAAGGTTGAC
CAAGGAAGAGCTGAAGAGCGCCTTCAAGTATTTGGGCTACAAGTTCACCACCTTTAGAGTCCACCAAGCCCTCCACGCCGCTGACGACAACTGCGACGATGTCATCAGCT
TTGAGGAGATGAGTAAACTTATTATGTATACCGCAGATTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGACCTCCAACGGCTTGATTTTTAAGTGTTTTCCAGCGTCGTTGACGGAGTTTGAGGTGGCCAAAGTTTTCAAGAACCACGACAAGGATGGAGATGGAAGGTTGAC
CAAGGAAGAGCTGAAGAGCGCCTTCAAGTATTTGGGCTACAAGTTCACCACCTTTAGAGTCCACCAAGCCCTCCACGCCGCTGACGACAACTGCGACGATGTCATCAGCT
TTGAGGAGATGAGTAAACTTATTATGTATACCGCAGATTCATAGCTATATGTACTCTCTTGGTGCAAGACCGCAGTTTGTCTCCAGTCGTCATATATTTCAAGTCCGTGT
GACAAATCTCTAGTCAGAGACATAAGTTTAACCTTGTAATTTAGCTTGAAAAACCATTATATAAGTTGTTCCTATAAGATATAACTATTCACCTAAATATATAAAAGCAA
CGAAATGAAATTCTGTGTATATGACACACATGTACCTGTGCAGGTGCGTAAAAGTTCATTTTGTTTGCTTATATATGTAGCAGCAAGCACACATGGCCATGGAATTTTGG
GACTAGTGTCTAGATTTATATCTCTTAAGACTATTTTCTACCCC
Protein sequenceShow/hide protein sequence
MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQALHAADDNCDDVISFEEMSKLIMYTADS