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CSPI02G19150 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19150
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr2:17499281..17499900
RNA-Seq ExpressionCSPI02G19150
SyntenyCSPI02G19150
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060897.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.7e-4988.79Show/hide
Query:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS
        MHTFTQYINLHF+EQ +TT IPNKISSN FLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEEL RAF+YLGSRWTA RVK A+RAVDAN DGVIS
Subjt:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS

Query:  LDEMSKLIVYVKGCRT
        +DEMSKLIVYVKG RT
Subjt:  LDEMSKLIVYVKGCRT

KAE8652092.1 hypothetical protein Csa_021918 [Cucumis sativus]1.2e-5899.14Show/hide
Query:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS
        MHTFTQYINLHFKEQ LTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS
Subjt:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS

Query:  LDEMSKLIVYVKGCRT
        LDEMSKLIVYVKGCRT
Subjt:  LDEMSKLIVYVKGCRT

KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1766.2Show/hide
Query:  LSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKG
        +SEEQL  IFK HD D D KL+KEEL +AF+YLGSR++A R +EA+R VD NHDGV+S+DEM+KLI Y KG
Subjt:  LSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKG

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1752.88Show/hide
Query:  ISSNFFLFFVCMGNKYSSL---------------SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIV
        I+ N  L F+C+ +  SS+               +EEQLA IFK HD D D KL+KEEL +AFNYLGSR+++ RVKEA+RA D N DG IS+DEM+KLI 
Subjt:  ISSNFFLFFVCMGNKYSSL---------------SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIV

Query:  YVKG
        Y KG
Subjt:  YVKG

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-1768.57Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKG
        +EEQLA IFK HD D D KL+KEEL +AFNYLGSR+++ RVKEA+RA D N DG IS+DEM+KLI Y KG
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKG

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein3.2e-38100Show/hide
Query:  MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKGCRT
        MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKGCRT
Subjt:  MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKGCRT

A0A0A0LRB6 Uncharacterized protein3.8e-1566.67Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVK
        SEEQLA +FK HD D D  LTKEEL +AF YLGSR+   RV+EA+RA D N DGVIS+DEM KLI Y K
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVK

A0A5A7V219 Putative calcium-binding protein CML108.2e-5088.79Show/hide
Query:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS
        MHTFTQYINLHF+EQ +TT IPNKISSN FLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEEL RAF+YLGSRWTA RVK A+RAVDAN DGVIS
Subjt:  MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVIS

Query:  LDEMSKLIVYVKGCRT
        +DEMSKLIVYVKG RT
Subjt:  LDEMSKLIVYVKGCRT

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.7e-1566.67Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVK
        SEEQLA +FK HD D D  LTKEEL +AF YLGSR++  RV+EA+RA D N DGVIS+DEM KLI Y K
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVK

A0A7N2KRS3 Uncharacterized protein4.7e-1353.52Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKGC
        +E+QL  IFK HD+D D KL+++EL  AF YLGSRW A R  +A+R  DAN DG I+ DE+ KL+ Y   C
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVYVKGC

SwissProt top hitse value%identityAlignment
P05933 Calmodulin1.3e-0435.37Show/hide
Query:  NFFLFFVCMGNKYSSL-SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI
        +F  F   M  K     +EE++   FK  D D +  +T EELT     LG R +   V + IR  D + DGVI+ +E S++I
Subjt:  NFFLFFVCMGNKYSSL-SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI

P30188 Probable calcium-binding protein CML351.7e-0434.78Show/hide
Query:  SLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLG-SRWTALRVKEAIRAVDANHDGVISLDEMSKLIV
        S+  E+L  +F+  D+DR+ K++ EEL R F  +G  R T       I  VD N DG +  D+  +++V
Subjt:  SLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLG-SRWTALRVKEAIRAVDANHDGVISLDEMSKLIV

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein5.1e-0425.84Show/hide
Query:  NIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI
        N   ++SS+F         K+       L  +F   D +RD +++ EEL ++F  LG + +    + A++  D + DG++ ++E + LI
Subjt:  NIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI

AT1G76650.1 calmodulin-like 385.1e-0432.26Show/hide
Query:  QLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI
        +L  +F   D +RD +++ EEL ++F  LG + +      A+R  D + DG++  +E S+LI
Subjt:  QLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI

AT1G76650.3 calmodulin-like 385.1e-0432.26Show/hide
Query:  QLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI
        +L  +F   D +RD +++ EEL ++F  LG + +      A+R  D + DG++  +E S+LI
Subjt:  QLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI

AT2G41410.1 Calcium-binding EF-hand family protein1.2e-0534.78Show/hide
Query:  SLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLG-SRWTALRVKEAIRAVDANHDGVISLDEMSKLIV
        S+  E+L  +F+  D+DR+ K++ EEL R F  +G  R T       I  VD N DG +  D+  +++V
Subjt:  SLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLG-SRWTALRVKEAIRAVDANHDGVISLDEMSKLIV

AT3G50360.1 centrin22.3e-0424.62Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI
        ++E+L   F+  D+D++ K++ +++ R    LG  +T   ++E +   D + DG +++DE  +++
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACTTTTACACAGTATATAAATCTCCATTTCAAAGAGCAAATCCTAACCACTAACATCCCAAACAAAATCTCTTCTAATTTCTTCTTGTTCTTCGTGTGCATGGG
AAACAAGTACAGTTCTTTGAGTGAAGAACAGCTCGCCTGGATTTTCAAGAAACATGACATCGACAGAGACAGGAAGCTGACCAAAGAAGAGTTGACACGAGCCTTCAACT
ATTTGGGTTCAAGGTGGACCGCCTTGAGAGTCAAGGAAGCCATTCGCGCTGTCGATGCAAACCACGATGGCGTCATCAGTTTGGATGAGATGAGTAAGCTCATTGTGTAT
GTCAAAGGTTGTCGTACCTAA
mRNA sequenceShow/hide mRNA sequence
CAACAACATGCACACTTTTACACAGTATATAAATCTCCATTTCAAAGAGCAAATCCTAACCACTAACATCCCAAACAAAATCTCTTCTAATTTCTTCTTGTTCTTCGTGT
GCATGGGAAACAAGTACAGTTCTTTGAGTGAAGAACAGCTCGCCTGGATTTTCAAGAAACATGACATCGACAGAGACAGGAAGCTGACCAAAGAAGAGTTGACACGAGCC
TTCAACTATTTGGGTTCAAGGTGGACCGCCTTGAGAGTCAAGGAAGCCATTCGCGCTGTCGATGCAAACCACGATGGCGTCATCAGTTTGGATGAGATGAGTAAGCTCAT
TGTGTATGTCAAAGGTTGTCGTACCTAAACAATTAATAATACTTAACTGCAACCATCTTTTACATGTCAACCTAAGTGGAACTTACTTGATGTCACCATGTAGTTGTGCC
TCTCAGTTGAGTCGTAAAATACAAATGCAGCTTAGTTAGCAGTCGAAAACTTTACGTCGCAGAGTTATAAATATTAGCAAAAAGAAAAAAAATCCTTTTTATTGGATAAA
AATGTAAAGTGTGATATCCACTCTCTGTCATAGATCTGAAATCTACATTTGCTAACGATGTTTAAGGGAA
Protein sequenceShow/hide protein sequence
MHTFTQYINLHFKEQILTTNIPNKISSNFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELTRAFNYLGSRWTALRVKEAIRAVDANHDGVISLDEMSKLIVY
VKGCRT