CuGenDBv2

Gene ID	CSPI02G19170
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	calmodulin-like
Genome location	Chr2:17512682..17513350
RNA-Seq Expression	CSPI02G19170
Synteny	CSPI02G19170
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]

1.1e-40

93.41

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Query:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        MTR LYDKKKSGYKLQKEEMK++FREHDFNGDGRLSIKELSRAFG FGAFFPLYRAAFGLF+ADDDGDGFISEQEL+KVVDYAIKCKYNLL
Subjt:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-25

68.6

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Query:  YDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        Y KK S   L +EE+K +F+EHDFNGDGRLSI+ELSRAFG  GAF PLYRA  G+ +AD +GDG+I+E ELDKVVDYAIKCKYN++
Subjt:  YDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-27

73.56

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Query:  LYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        LY KKKS  +L++EE+K +FREHD NGDGRLSI+ELSRAFG FGAF PLYRAA  +  AD +GDGFI+EQELDKVVDYAIKCKYN++
Subjt:  LYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]

1.4e-43

100

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Query:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
Subjt:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]

2.8e-39

100

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Query:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIK
        MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIK
Subjt:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKW4 Uncharacterized protein

6.9e-44

100

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Query:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
Subjt:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

A0A0A0LRC1 Uncharacterized protein

1.2e-16

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Query:  KLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKY
        +L +E++KE+FREHD +GDGRLS+ E+ +AFG FG+  P Y+A +G+  AD++GDGFI E+ELDK+VDYA K ++
Subjt:  KLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKY

A0A5A7UY46 Putative calcium-binding protein CML10

5.5e-41

93.41

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Query:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        MTR LYDKKKSGYKLQKEEMK++FREHDFNGDGRLSIKELSRAFG FGAFFPLYRAAFGLF+ADDDGDGFISEQEL+KVVDYAIKCKYNLL
Subjt:  MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

A0A5A7UYC0 Putative calcium-binding protein CML10

1.2e-16

53.85

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Query:  SGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKY
        S  +L +E++KE+FREHD +GDGRLS+ E+ +AFG FG+  P Y+A +G+  AD++GDG+I E+ELDK+VDYA K ++
Subjt:  SGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKY

A0A6J1CS20 calmodulin-like protein 5

6.7e-23

64.29

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Query:  KKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL
        KKK   KL +EE+K +FR HD NGDG LSIKELSRAFG  GA  PLYRA  G+  AD DGDG I+++EL+KVVDYA+KCKY+++
Subjt:  KKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

SwissProt top hits

e value

%identity

Alignment

Q8RZB5 Probable calcium-binding protein CML10

5.1e-04

45.76

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Query:  KEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQE
        +EEM+ +FR+ D NGDGR+S  EL   F   G        A  +  AD DGDGFIS  E
Subjt:  KEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQE

Arabidopsis top hits

e value

%identity

Alignment

AT1G73630.1 EF hand calcium-binding protein family

6.9e-04

36.84

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Query:  EMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQE
        E+K++F + D NGDG++S+ EL   F   G  +        L   D D DGFI+++E
Subjt:  EMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQE

Sequences

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CDS sequence

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ATGACTCGTCAATTATATGACAAGAAGAAATCAGGGTACAAGTTGCAAAAAGAAGAAATGAAAGAAATGTTTAGGGAGCATGATTTCAATGGCGACGGTCGCTTGAGCAT
TAAAGAATTGTCGAGAGCATTCGGCCAATTTGGCGCATTCTTCCCTCTCTACCGTGCAGCTTTTGGGTTGTTCCTTGCAGATGATGACGGCGATGGATTTATCAGTGAGC
AAGAACTAGATAAAGTGGTAGATTATGCTATTAAATGTAAGTATAACCTACTTTAG

mRNA sequence

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AACCAAGAGGCTACGCTTTTTAAGGACCCTTCCCTTCCACTTTCTTCTCAACAGTTCTTCAATCGAAGAAAAACGGCGAAGGTTGCGAAGTCGTCTAGGTTTCATCTAAA
ATGACTCGTCAATTATATGACAAGAAGAAATCAGGGTACAAGTTGCAAAAAGAAGAAATGAAAGAAATGTTTAGGGAGCATGATTTCAATGGCGACGGTCGCTTGAGCAT
TAAAGAATTGTCGAGAGCATTCGGCCAATTTGGCGCATTCTTCCCTCTCTACCGTGCAGCTTTTGGGTTGTTCCTTGCAGATGATGACGGCGATGGATTTATCAGTGAGC
AAGAACTAGATAAAGTGGTAGATTATGCTATTAAATGTAAGTATAACCTACTTTAGTTATCTTTTCCATCCTGCTGTGGAAGGTTCCCTAGTGAGTGTGAGTTGTTGATG
TAAAAAAATAATATACAGAAAGGTAATTTGTGTGTTCAAGAGATACCTTCCCCTATTATTGTAAAATGCCTTTCCTGATGGCTGATGCGAAGATGATGATGATAGCATTT
CCAATAAAAATAAATTTTATGCTTCATTCTTGCTCTTGCATGATATGATAACAATTTTCTAAATATATGTATATTGTTACAAAATAATAGACGCACTTTATTTTAACAAT
GTACCAGGA

Protein sequence

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MTRQLYDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADDDGDGFISEQELDKVVDYAIKCKYNLL

CSPI02G19170 (gene) of Cucumber (PI 183967) v1 genome