; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G19210 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19210
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEF-hand domain-containing protein
Genome locationChr2:17522331..17522522
RNA-Seq ExpressionCSPI02G19210
SyntenyCSPI02G19210
Gene Ontology termsNA
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060889.1 hypothetical protein E6C27_scaffold501G00220 [Cucumis melo var. makuwa]3.7e-0663.27Show/hide
Query:  QKAFYGMAFADKDGDGFCD-ENELEKLVDHVMRFNNAKQRQDDKSNRST
        +KA YG+AF+DKDG    D ENELEKLVD++MRF+  K++QDDKS++ST
Subjt:  QKAFYGMAFADKDGDGFCD-ENELEKLVDHVMRFNNAKQRQDDKSNRST

KAA0060895.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.8e-0561.11Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD---ENELEKLVDHVMRFNNAK
        MQAL+S G ++ SFQKA YG++ ADKDGDG  D   E+ELEKLVD+VMRF   +
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD---ENELEKLVDHVMRFNNAK

KGN62514.1 hypothetical protein Csa_021819 [Cucumis sativus]2.0e-0454.24Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDK
        MQAL+S G M+ SFQKA YG++ ADKDGDG  D  E E+E L+D+VMRF   +  +  K
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDK

KGN62519.1 hypothetical protein Csa_022451 [Cucumis sativus]5.4e-2698.41Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKSNRSTK
        MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKS+RSTK
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKSNRSTK

KGN62521.1 hypothetical protein Csa_021806 [Cucumis sativus]1.1e-0558.33Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDKS
        MQAL+S G M+ SFQKA YG+AFADKDGDG  D    E++ LVD+VMRF  +K    D S
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDKS

TrEMBL top hitse value%identityAlignment
A0A0A0LNG3 Uncharacterized protein9.8e-0554.24Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDK
        MQAL+S G M+ SFQKA YG++ ADKDGDG  D  E E+E L+D+VMRF   +  +  K
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDK

A0A0A0LNG5 Uncharacterized protein2.6e-2698.41Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKSNRSTK
        MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKS+RSTK
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKSNRSTK

A0A0A0LRC3 EF-hand domain-containing protein5.2e-0658.33Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDKS
        MQAL+S G M+ SFQKA YG+AFADKDGDG  D    E++ LVD+VMRF  +K    D S
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD--ENELEKLVDHVMRFNNAKQRQDDKS

A0A5A7V4S6 Putative calcium-binding protein CML108.8e-0661.11Show/hide
Query:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD---ENELEKLVDHVMRFNNAK
        MQAL+S G ++ SFQKA YG++ ADKDGDG  D   E+ELEKLVD+VMRF   +
Subjt:  MQALSSTGFMINSFQKAFYGMAFADKDGDGFCD---ENELEKLVDHVMRFNNAK

A0A5A7V5A0 Uncharacterized protein1.8e-0663.27Show/hide
Query:  QKAFYGMAFADKDGDGFCD-ENELEKLVDHVMRFNNAKQRQDDKSNRST
        +KA YG+AF+DKDG    D ENELEKLVD++MRF+  K++QDDKS++ST
Subjt:  QKAFYGMAFADKDGDGFCD-ENELEKLVDHVMRFNNAKQRQDDKSNRST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCCTAAGCTCTACGGGGTTTATGATCAATTCATTCCAGAAAGCTTTCTATGGGATGGCTTTTGCTGACAAAGATGGTGATGGTTTCTGTGATGAAAACGAGTT
GGAGAAACTCGTCGACCATGTCATGAGGTTTAATAATGCAAAGCAACGGCAGGATGATAAATCAAATCGATCGACCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCCTAAGCTCTACGGGGTTTATGATCAATTCATTCCAGAAAGCTTTCTATGGGATGGCTTTTGCTGACAAAGATGGTGATGGTTTCTGTGATGAAAACGAGTT
GGAGAAACTCGTCGACCATGTCATGAGGTTTAATAATGCAAAGCAACGGCAGGATGATAAATCAAATCGATCGACCAAGTAA
Protein sequenceShow/hide protein sequence
MQALSSTGFMINSFQKAFYGMAFADKDGDGFCDENELEKLVDHVMRFNNAKQRQDDKSNRSTK