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CSPI02G19230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEF-hand domain-containing protein
Genome locationChr2:17532987..17533286
RNA-Seq ExpressionCSPI02G19230
SyntenyCSPI02G19230
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060895.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.8e-3184.09Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDL-EGGEIDKLLDYVMRFQAPK
        MAMSRSQLKLTRDEVREILEEHDVDGDG LTKQEVMQALNSMGA+MSFQKAHYGV+ ADKDGDG VDL    E++KL+DYVMRFQ P+
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDL-EGGEIDKLLDYVMRFQAPK

KAE8652093.1 hypothetical protein Csa_022146 [Cucumis sativus]5.2e-1556.1Show/hide
Query:  MAMSRSQLKLTRDE-VREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVM
        M++SRSQL L+RDE +++I EE+DVDGDG LTKQEVMQA+++MG  + FQ   +G++FAD+D DG VD +  E++KL+D V+
Subjt:  MAMSRSQLKLTRDE-VREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVM

KGN62514.1 hypothetical protein Csa_021819 [Cucumis sativus]4.7e-3283.91Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPK
        MAMSRSQLKLTRDEVREILEEHDVDGDG LTKQEVMQALNSMG+MMSFQKAHYGV+ ADKDGDG VDL   E++ L+DYVMRFQ P+
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPK

KGN62521.1 hypothetical protein Csa_021806 [Cucumis sativus]1.5e-4393.94Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDVPQDASPEALP
        MA SRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMG MMSFQKAHYGVAFADKDGDGAVDLEGGEID L+DYVMRFQA KDVP+DASPEALP
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDVPQDASPEALP

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]1.2e-1446.99Show/hide
Query:  AMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQ
        A+  ++L+L+R++++EI  EHD+DGDGRL+  E+++A    G+++ F KAHYG+A AD++GDG ++ E  E+DKL+DY  +FQ
Subjt:  AMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNG3 Uncharacterized protein2.3e-3283.91Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPK
        MAMSRSQLKLTRDEVREILEEHDVDGDG LTKQEVMQALNSMG+MMSFQKAHYGV+ ADKDGDG VDL   E++ L+DYVMRFQ P+
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPK

A0A0A0LP50 Uncharacterized protein5.4e-1856.67Show/hide
Query:  MAMSRSQLKLTRDE-VREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDV
        M++SRSQL L+RDE +++I EE+DVDGDG LTKQEVMQA+++MG  + FQ   +G++FAD+D DG VD +  E++KL+D V+RFQ  K V
Subjt:  MAMSRSQLKLTRDE-VREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDV

A0A0A0LRC1 Uncharacterized protein5.6e-1546.43Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQ
        M+ + ++L+L+R++++EI  EHD+DGDGRL+  E+++A    G+++ F KAHYG+A AD++GDG ++ E  E+DKL+DY  +FQ
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQ

A0A0A0LRC3 EF-hand domain-containing protein7.5e-4493.94Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDVPQDASPEALP
        MA SRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMG MMSFQKAHYGVAFADKDGDGAVDLEGGEID L+DYVMRFQA KDVP+DASPEALP
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDVPQDASPEALP

A0A5A7V4S6 Putative calcium-binding protein CML108.6e-3284.09Show/hide
Query:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDL-EGGEIDKLLDYVMRFQAPK
        MAMSRSQLKLTRDEVREILEEHDVDGDG LTKQEVMQALNSMGA+MSFQKAHYGV+ ADKDGDG VDL    E++KL+DYVMRFQ P+
Subjt:  MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDL-EGGEIDKLLDYVMRFQAPK

SwissProt top hitse value%identityAlignment
Q0DZP5 Probable calcium-binding protein CML173.9e-0536.23Show/hide
Query:  EVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMR
        E+R + E  D DGDGR+T++E+ ++L  +G  +  ++    +A  D +GDG VD++  E  +L + VMR
Subjt:  EVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTCGAGGTCTCAATTGAAGTTGACTAGGGACGAGGTTAGGGAGATCTTAGAAGAACATGATGTGGACGGTGATGGTCGCCTGACTAAGCAAGAGGTGATGCA
AGCCCTGAACTCCATGGGTGCTATGATGTCGTTTCAGAAAGCTCACTATGGTGTTGCTTTTGCTGACAAAGATGGAGATGGTGCAGTCGATCTAGAAGGTGGTGAGATTG
ATAAGCTTCTTGACTATGTCATGAGGTTTCAGGCCCCAAAGGACGTCCCTCAAGATGCCAGCCCAGAAGCCTTGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGTCGAGGTCTCAATTGAAGTTGACTAGGGACGAGGTTAGGGAGATCTTAGAAGAACATGATGTGGACGGTGATGGTCGCCTGACTAAGCAAGAGGTGATGCA
AGCCCTGAACTCCATGGGTGCTATGATGTCGTTTCAGAAAGCTCACTATGGTGTTGCTTTTGCTGACAAAGATGGAGATGGTGCAGTCGATCTAGAAGGTGGTGAGATTG
ATAAGCTTCTTGACTATGTCATGAGGTTTCAGGCCCCAAAGGACGTCCCTCAAGATGCCAGCCCAGAAGCCTTGCCATGA
Protein sequenceShow/hide protein sequence
MAMSRSQLKLTRDEVREILEEHDVDGDGRLTKQEVMQALNSMGAMMSFQKAHYGVAFADKDGDGAVDLEGGEIDKLLDYVMRFQAPKDVPQDASPEALP