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CSPI02G19760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G19760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionExtensin_2 domain-containing protein
Genome locationChr2:17789003..17789615
RNA-Seq ExpressionCSPI02G19760
SyntenyCSPI02G19760
Gene Ontology termsGO:0009664 - plant-type cell wall organization (biological process)
GO:0005199 - structural constituent of cell wall (molecular function)
InterPro domainsIPR006706 - Extensin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62573.1 hypothetical protein Csa_021860 [Cucumis sativus]6.2e-4298.94Show/hide
Query:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPP+AFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
Subjt:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

PWA69666.1 hypothetical protein CTI12_AA295730 [Artemisia annua]1.3e-0745.95Show/hide
Query:  HSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        H   H     +S + +Y + SPPPP+ ++Y SPPPP+  ++ +S PPPP  +++ SPPPPS ++YTSPPPP  V
Subjt:  HSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

XP_010257781.2 PREDICTED: extensin-2-like [Nelumbo nucifera]2.9e-0751.79Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        YL+ SPPPP  + Y SPPPP   +  +S PPPP  + + SPPPP  + Y SPPPP+
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

XP_023520927.1 extensin-like [Cucurbita pepo subsp. pepo]6.2e-1050.94Show/hide
Query:  MNGVGLFLLFLSLLSFFSHSSVHA----RELKQSAK--SAYLFTSP----------PPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYT
        MN VG FLLF  + S FSH  +       ELK S +  SA+LFTSP          PPPAAFL+ SPPPP R F +    PPP AFLFLS PPP    + 
Subjt:  MNGVGLFLLFLSLLSFFSHSSVHA----RELKQSAK--SAYLFTSP----------PPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYT

Query:  SPPPPA
        SPPP A
Subjt:  SPPPPA

XP_023909450.1 extensin-3-like [Quercus suber]5.8e-0856.9Show/hide
Query:  SAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        S++ F SPPPP++F + SPPPP+  +    SPPPPS+F F SPPPPS+F + SPPPP+
Subjt:  SAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LLD7 Extensin_2 domain-containing protein3.0e-4298.94Show/hide
Query:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
        MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPP+AFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE
Subjt:  MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE

A0A1U7ZTV9 extensin-2-like1.4e-0751.79Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA
        YL+ SPPPP  + Y SPPPP   +  +S PPPP  + + SPPPP  + Y SPPPP+
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPA

A0A2U1N836 Extensin_2 domain-containing protein6.3e-0845.95Show/hide
Query:  HSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        H   H     +S + +Y + SPPPP+ ++Y SPPPP+  ++ +S PPPP  +++ SPPPPS ++YTSPPPP  V
Subjt:  HSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

A0A5J5AC35 Uncharacterized protein1.8e-0750.85Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLS-PPPPSAFLYTSPPPPASV
        Y++ SPPPP A++Y SPPPP   +  +S PPPP  +L+ S PPPP  + Y SPPPP  +
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLS-PPPPSAFLYTSPPPPASV

A0A6J1FAJ8 uncharacterized protein LOC1114439071.8e-0752.24Show/hide
Query:  RELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPAS
        R+LK      Y+++SPPPP  ++Y SPPPP R     SSPPPP  +++ SPPPP  F+Y+SPPPPA+
Subjt:  RELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPAS

SwissProt top hitse value%identityAlignment
O65375 Leucine-rich repeat extensin-like protein 11.6e-0552.73Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        Y+++SPPPP  ++Y SPPPP   +   SSPPPP  +++ SPPPP  ++Y+SPPPP
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

P06599 Extensin6.9e-0439.19Show/hide
Query:  YLFTSPPPPAAF---------LYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPS-------AFLYTSPPPPASV
        Y + SPPPP  F          Y SPPPP   +  +S PPP   + + SPPPP         + Y SPPPP  V
Subjt:  YLFTSPPPPAAF---------LYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPS-------AFLYTSPPPPASV

Q9FS16 Extensin-31.1e-0441.18Show/hide
Query:  KSAYLFTSPPPPAAF-----LYLSPPPPARRFLRQSSPPPPSAF----LFLSPPPP-SAFLYTSPPPP
        K  Y++ SPPPP        +Y SPPPP + ++ +S PPP   +    ++ SPPPP   ++Y SPPPP
Subjt:  KSAYLFTSPPPPAAF-----LYLSPPPPARRFLRQSSPPPPSAF----LFLSPPPP-SAFLYTSPPPP

Q9SN46 Leucine-rich repeat extensin-like protein 56.9e-0449.02Show/hide
Query:  SPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        SPPPP    Y  PPPP+      S PP P  + + SPPPP A  Y+ PPPP
Subjt:  SPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

Q9T0K5 Leucine-rich repeat extensin-like protein 31.4e-0450.94Show/hide
Query:  FTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        ++ PPPP    Y SPPPP    +  SSPPPP  + + SPPPP    Y+SPPPP
Subjt:  FTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 11.2e-0652.73Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        Y+++SPPPP  ++Y SPPPP   +   SSPPPP  +++ SPPPP  ++Y+SPPPP
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP

AT1G26240.1 Proline-rich extensin-like family protein6.9e-0750Show/hide
Query:  SAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        S Y++ SPPPP  ++Y SPPPP   ++ +S PPPP  +++ SPPPP  ++Y SPPPP  V
Subjt:  SAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT1G26250.1 Proline-rich extensin-like family protein1.4e-0750Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        Y+++SPPPP  ++Y SPPPP   +    SPPPP  +++ SPPPP  ++Y+SPPPP  V
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT4G08370.1 Proline-rich extensin-like family protein1.1e-0750Show/hide
Query:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV
        Y++ SPPPP  ++Y SPP P   ++ +S PPPP  F++ SPPPP+ ++Y SPPPP  V
Subjt:  YLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASV

AT4G13340.1 Leucine-rich repeat (LRR) family protein9.9e-0650.94Show/hide
Query:  FTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP
        ++ PPPP    Y SPPPP    +  SSPPPP  + + SPPPP    Y+SPPPP
Subjt:  FTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGTGTAGGGTTGTTTCTCCTCTTCCTTTCCCTTCTCTCCTTTTTCTCTCATTCATCTGTCCATGCCCGCGAGCTGAAGCAATCTGCCAAATCTGCCTATCTCTT
CACCTCTCCGCCGCCTCCCGCTGCATTCCTCTACCTCTCCCCACCACCTCCTGCTAGACGCTTCTTAAGACAGTCTTCGCCTCCGCCTCCGTCGGCCTTCTTGTTTCTTT
CTCCGCCACCTCCTTCTGCGTTTCTGTATACCTCTCCGCCGCCGCCGGCGTCGGTGGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
GTGTATTATTAATACCAAATATGTAAAAGTGTTAATATAAATAATTGACGTTAGGTTTGAATTTGAGATACAATCTTCATACTCATATTGAATCAAGAAAATGAACGGTG
TAGGGTTGTTTCTCCTCTTCCTTTCCCTTCTCTCCTTTTTCTCTCATTCATCTGTCCATGCCCGCGAGCTGAAGCAATCTGCCAAATCTGCCTATCTCTTCACCTCTCCG
CCGCCTCCCGCTGCATTCCTCTACCTCTCCCCACCACCTCCTGCTAGACGCTTCTTAAGACAGTCTTCGCCTCCGCCTCCGTCGGCCTTCTTGTTTCTTTCTCCGCCACC
TCCTTCTGCGTTTCTGTATACCTCTCCGCCGCCGCCGGCGTCGGTGGTGGAGTGATGGGTGAGATGAGATGGGCTTTTTCGTAGCGAAGGCCCATTTATTATTGTAAGGT
AACACACAAATGTGATGTAATTTGTGTGTAGTTTTTAGAATATTAATTGTGAGTCTCTCTCTCTAAATGTTTAGTCTAAGAAACAACTATATAGCATTTGAAGATGTATG
GAGACCTTATGTGAACCAATAATGGAAATTGATGAAAAAAATTAATTGATTCCAAGTTCGAAC
Protein sequenceShow/hide protein sequence
MNGVGLFLLFLSLLSFFSHSSVHARELKQSAKSAYLFTSPPPPAAFLYLSPPPPARRFLRQSSPPPPSAFLFLSPPPPSAFLYTSPPPPASVVE