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CSPI02G20000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G20000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger and BTB domain-containing protein 47
Genome locationChr2:17886481..17887522
RNA-Seq ExpressionCSPI02G20000
SyntenyCSPI02G20000
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065239.1 zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]2.4e-4088.14Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKK--PPPPLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKT
        MGKKKTQKTKEIAVAIAETSTSKLADDG IGQ IQPRKRGRPRKVLDEQQNEQE+KK  PPPPLL EV ENPPEKKIK TVDE   GS+ EGSK+EEPKT
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKK--PPPPLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKT

Query:  GDGSRSRGRRKNKPRKSS
        GDGSRSRGRRKNKPRKSS
Subjt:  GDGSRSRGRRKNKPRKSS

KAG7020516.1 hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-2466.94Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGII---GQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE
        MGKKKTQKTK+I+VAIAETSTSKL DDG     GQ +QPRKRGRPRKVLDE  ++   KK PPP  +VA+ P +KK K T DE    SM   SK+   EE
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGII---GQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE

Query:  PKTGDGSRSRGRRKNKPRKSS
        PK+GDGSRSRGRRKNKPRKSS
Subjt:  PKTGDGSRSRGRRKNKPRKSS

KGN62596.1 hypothetical protein Csa_022088 [Cucumis sativus]8.9e-5199.13Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG
        MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVL+EQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG

Query:  SRSRGRRKNKPRKSS
        SRSRGRRKNKPRKSS
Subjt:  SRSRGRRKNKPRKSS

XP_023002541.1 uncharacterized protein LOC111496353 [Cucurbita maxima]1.0e-2266.12Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDG---IIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE
        MGKKKTQKTK+I+VAIAETSTSKL DDG     GQ  QPRKRGRPRKVLDE  +++  K  PPP  +VA+ P +KK K T DE  + SM   SK+   EE
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDG---IIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE

Query:  PKTGDGSRSRGRRKNKPRKSS
        PK+GDGSRSRGRRKNKPRKSS
Subjt:  PKTGDGSRSRGRRKNKPRKSS

XP_038884964.1 uncharacterized protein LOC120075548 [Benincasa hispida]9.5e-3783.48Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG
        MGKKK QKTKEIAVAIAETS SKLADDG IGQ IQPRKRGRPRKVLDE QN+QE+KK  PPL EVAENPPEKK K TVD+   GSM EGSK+ EPKTGDG
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG

Query:  SRSRGRRKNKPRKSS
        SRSRGRRKNKPRKSS
Subjt:  SRSRGRRKNKPRKSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRH2 Uncharacterized protein4.3e-5199.13Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG
        MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVL+EQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDG

Query:  SRSRGRRKNKPRKSS
        SRSRGRRKNKPRKSS
Subjt:  SRSRGRRKNKPRKSS

A0A251R9L0 Uncharacterized protein2.2e-0741.48Show/hide
Query:  MGKKKTQKTKEIAVAIAET-STSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPE---KKIKGTVD----------------E
        MGKKK QKTKE++VAIAE  ST          QP  PRKRGRPRK++++ ++ +E   P       A    E   KK K T D                E
Subjt:  MGKKKTQKTKEIAVAIAET-STSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPE---KKIKGTVD----------------E

Query:  AALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS
         +  S+  G+K+EE +    SRSR RRK+KPRKSS
Subjt:  AALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS

A0A314ZHL5 Neuromodulin2.9e-0741.18Show/hide
Query:  MGKKKTQKTKEIAVAIAET-STSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPE---KKIKGTVD-----------------
        MGKKK QKTKE++VAIAE  ST          QP  PRKRGRPRK++++ ++ +E   P       A    E   KK K T D                 
Subjt:  MGKKKTQKTKEIAVAIAET-STSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPE---KKIKGTVD-----------------

Query:  EAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS
        E +  S+  G+K+EE +    SRSR RRK+KPRKSS
Subjt:  EAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS

A0A5A7VIE6 Zinc finger and BTB domain-containing protein 471.2e-4088.14Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKK--PPPPLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKT
        MGKKKTQKTKEIAVAIAETSTSKLADDG IGQ IQPRKRGRPRKVLDEQQNEQE+KK  PPPPLL EV ENPPEKKIK TVDE   GS+ EGSK+EEPKT
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKK--PPPPLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKT

Query:  GDGSRSRGRRKNKPRKSS
        GDGSRSRGRRKNKPRKSS
Subjt:  GDGSRSRGRRKNKPRKSS

A0A6J1KLK8 uncharacterized protein LOC1114963534.9e-2366.12Show/hide
Query:  MGKKKTQKTKEIAVAIAETSTSKLADDG---IIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE
        MGKKKTQKTK+I+VAIAETSTSKL DDG     GQ  QPRKRGRPRKVLDE  +++  K  PPP  +VA+ P +KK K T DE  + SM   SK+   EE
Subjt:  MGKKKTQKTKEIAVAIAETSTSKLADDG---IIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKE---EE

Query:  PKTGDGSRSRGRRKNKPRKSS
        PK+GDGSRSRGRRKNKPRKSS
Subjt:  PKTGDGSRSRGRRKNKPRKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGAAAAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAG
AAAAAGGGGCCGACCTCGTAAGGTTCTCGATGAACAACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAA
TTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCCATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAA
CCCAGAAAAAGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
TCGGAACTATGAAAATATCACCATTAAAGTTAGAGTTATCGAATTGATCTAAGGGGAAACGGTAAGGATGAGAAGATATAGTTGGTTTAAAAAACCATTATGATTCATCC
ACAAATAAGATATCATTAGCCTAAAATTGAGTCCATGAAAGACCCTTTTGTTCCAAAAAGGGTTAGTTTCCCCAAAAATGCAATGAATGAATGAATCAAAATCCCCCCAA
AGGCCATCAAAACTCCCATTTCAACTCGGTCTGTGCTGTATAGTAGGGCTCTTCTCACAATCGCCCCCTTTTTTTAGAGCCATAGTAGAATTTTGCAGCAGTGGATTGGC
TACAAAGATTTGACGTTTTTGTTTTCTTCTTCTTCTACTACTTTTCTCCAACTTTTCCCCCTTCTTCCCCTTTCTTCCAAACTCCGCCGATGGATTTCGCTTCGATTTTC
TATTGAACAAACCTTCCGATTCTGTGGGTTTTCATTTGGGTCCCTTAATTTCTCTTCCGTTTCCTCGTTTGTTTGATGGGTAAGAAAAAAACCCAGAAAACTAAGGAGAT
TGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATCATCGGCCAACCCATACAGCCTAGAAAAAGGGGCCGACCTCGTAAGGTTCTCGATGAAC
AACAAAACGAGCAGGAGAGCAAGAAGCCGCCGCCGCCGTTGCTGGAAGTTGCAGAAAATCCACCGGAGAAGAAAATTAAAGGCACTGTGGATGAAGCGGCGCTGGGTTCC
ATGATAGAAGGTTCGAAAGAAGAAGAACCCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAATGGGTAAACAAAAGTCA
AAAAACAATTTGATGGGTTTTTTCTTTTTTTCTTTTTGGAATTTGGGAATCTGAAAAACCTGAAGAAAAATCTCTGGGTTTCGTTTCTTTGATTTTTGTGGGTAAATTGT
ATTGTTGTTGTATTTGATTGGATTAGGTTAAAAGAAATGAAATTTGGATTGG
Protein sequenceShow/hide protein sequence
MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLDEQQNEQESKKPPPPLLEVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNK
PRKSS