; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G21500 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G21500
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCHCH domain-containing protein
Genome locationChr2:18836501..18839354
RNA-Seq ExpressionCSPI02G21500
SyntenyCSPI02G21500
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]6.1e-6595.14Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]1.3e-6494.44Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]6.9e-69100Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]2.8e-6293.79Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA  APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVASN GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG

Query:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]9.3e-6695.83Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPAS APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSS SSAPSVA+N GGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein3.3e-69100Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like6.5e-6594.44Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVA+NSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 102.9e-6595.14Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGS

Query:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial1.4e-6293.79Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA  APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVASN GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG

Query:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like4.0e-6293.1Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA+ APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS  SSAPSVA N GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSA-SSAPSVASNSGG

Query:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein8.2e-3656.55Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPA-SPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGG
        MPR SSGGRS+ RP+  A  R+PP  + + APPPA  Q   GGS LG +GA+I +G+A+GTG+A  HR VD+VMGPRT +HETV S   SA +  +    
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPA-SPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGG

Query:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
          AC++ SK+FQDC+NH+GSDISKCQFY+DML EC+++SGSV+ A
Subjt:  SDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)1.3e-4165.75Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE V+ +SAS+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSG

Query:  GSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
         S  C++ +K+FQDC+  YGS+ISKCQFY+DML ECR++SGSV+GA
Subjt:  GSDACNVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)2.9e-2564.04Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE V+ +SAS+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVD-SSASSAPSVASNSG

Query:  GSDACNVQSKSFQD
         S  C++ +K+FQD
Subjt:  GSDACNVQSKSFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTTCCCGTCCCGCCCCACGCGCTCCACTTCGCAATCCTCCGGCGCCAGCTAGTCCCGCTCCTCCACCTGCACCTGTACA
AGGTGGTGGTGGTGGTTCTATGCTTGGAGGTCTTGGTGCAACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAATGG
GTCCTCGAACCATCCAGCATGAGACCGTTGATTCATCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTCAAAATCCTTT
CAAGATTGCCTGAACCACTATGGAAGTGACATTAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAGTGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CAATTGGCAGACTACGTGATTTATGTACTTGTCAACTTGCGGTGTTTAGAAAATTAATCCGAAACTCCTAGACTCTGGGGCTCTATATAAACCCCAACAAAGTAAAATTC
GTCCGCAAATCATTAACCCTAAAATTTCCAATATCGTTACTGCTAGAGACCGCCACCGCCATTTTCTTTTACATTTCTTCTACGCAGTCGCCCTTTCTTTTAATCCTTAA
CCATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTTCCCGTCCCGCCCCACGCGCTCCACTTCGCAATCCTCCGGCGCCAGCTAGTCCCGCTCCTCCACCTGCACCTGTA
CAAGGTGGTGGTGGTGGTTCTATGCTTGGAGGTCTTGGTGCAACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAAT
GGGTCCTCGAACCATCCAGCATGAGACCGTTGATTCATCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTAATGTTCAGTCAAAATCCT
TTCAAGATTGCCTGAACCACTATGGAAGTGACATTAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAGTGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAAT
AATTGATTTTAAAACAATCGTTATTCACTATTTTTCATTTGGATGTAACCGCAAGGAGCGGTGTCAAGTTTATTGTGTGTTTCGACTGTTTACACTTTATTACGGCAACT
TCTCTACAATTATAAATGGTGTTTAATAATGAAATATTTCATCATTTGGACTCAATTGTTATGGCTTTTGTGTTTTTGTGTCTTTCCTTGTGAACTTAAAATTGATGTTT
GGATTATTAAACGAACACATCTACTTGATGAATAAAGGAAAAATAACAGTATTAGATCTTTTTTATTACGATCACACCCATACAGAAGATCTAATATGGGTGTGTAATTG
GCTTTTGTCTCATTCAAGATATAATAAG
Protein sequenceShow/hide protein sequence
MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVDSSASSAPSVASNSGGSDACNVQSKSF
QDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA