CuGenDBv2

Gene ID	CSPI02G21580
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	TPR_REGION domain-containing protein
Genome location	Chr2:18910570..18912235
RNA-Seq Expression	CSPI02G21580
Synteny	CSPI02G21580
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152601.1 uncharacterized protein LOC101214199 [Cucumis sativus]

2.9e-100

100

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

5.5e-99

99.05

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKLREEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

9.4e-91

91.94

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

3.2e-91

92.42

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

5.1e-97

97.63

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

1.4e-100

100

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

2.7e-99

99.05

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKLREEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A5A7VBU3 TPR domain protein

2.7e-99

99.05

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYE KKLREEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

4.5e-91

91.94

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLSQNAN+Y WLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

5.9e-91

91.47

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT
        MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDT

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLSQNAN+Y WLGKCYE KKLR EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLS+S
Subjt:  AREALERLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.0e-34

44.28

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Query:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQG
        T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P +S + SLA+  + EA+  IA+ P DAA HI++ALALD  G
Subjt:  TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQG

Query:  FKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTL---SQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLS
          TSAL+S D AL+    KSLS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K L+E+A+ A+ EAL  +P   
Subjt:  FKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTL---SQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLS

Query:  N
        N
Subjt:  N

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAATATTCCGCAGAGATACTTCGCCAAGCTCCGATTGCGCTT
CCGATCCAACGTCGAATCTAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGCAGAAGAAGTCG
TAGCGGAAGCCAATAAGGCCATAGCTCTGGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACACTCAAGGATTCAAAACCTCTGCTCTGGAATCG
CTCGATACAGCTCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAATCGACGAGCCCT
AGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACTGAGAGAAGAGG
CCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAATGCTAGGGAGGCATTGGAACGTCTATCATCATCGTAA

mRNA sequence

Show/hide mRNA sequence

AGATAGAGTGTGATATTTTTTAAGGGCTTAAATAATAGTTAGCTTAAAAAAGAAAGGAGAAGAAAAGTTTTACTTTTAGAAAGAAAAAAAATCATTTAAACGAAGCAACA
TCTGCCCAAATTGATTGAAATTATAATTTCCTATTAACTCTGACCGTCGCTGTAGAGTTGACGGCAAAATTAAACCGCCGCTCTAAGCAGTCCCGCCTCCGATCTTCTCC
AATCCCTGACTCTGTACAGATCCACTTTTGATCGTACTCGGAGTTTATCCGATCCCCGGAATTAATCGAAAGCACAGTGAAAGAAATTGGCTGCACGCAGTTCTTTCAGA
GATCGATAAACATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTCGCTATGCACAATATTCCGCAGAGATACTTCGCCAAGCTC
CGATTGCGCTTCCGATCCAACGTCGAATCTAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACATCGTTAGC
AGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATAGCTCTGGATCCTAAGGATGCCGCCGCTCACATCCTCAAAGCTTTGGCTCTCGACACTCAAGGATTCAAAACCTCTG
CTCTGGAATCGCTCGATACAGCTCTATCGCCGCTCGTCGCTAAGTCGCTCAGCGATGAAGAACGAGGCGACGCGTTGTTCAAGCGAGCTGAGTTGAAGATGTCCACGAAT
CGACGAGCCCTAGTTGACTCGGCTTTGGCTGATTTGACCGAGTCCGTGACACTGAGTCAGAATGCAAATTCCTACTATTGGTTGGGGAAATGCTATGAGACGAAGAAACT
GAGAGAAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAATGCTAGGGAGGCATTGGAACGTCTATCATCATCGTAATCAAGCTGATGTC
TACTGTGATCTATGGAATGTCAACGCTAGAAGATAAGAGCATCTTTCAATTTTTCCAGGTCCAAATATCTCCTCCATTTTCGCTGATTCTTGCTAATGCCTTCCCTTAAG
CCGTATAACGATTGAGATGCTGAATTGGCTCGTGAGATGAAATCCTATCTCCGATTCCCATCTCCAAGATAGGCGTTTGGAATGGGGTTTAATATTTACTTAGTTTCCTT
GTCTTTGATTTAGTCTGTTGATTTACCGTAGGTTTAGTCGTAATTTATGTAAAATGAGGGATTGGAACAAACCCAGAAAGAAAATTAGTAATTAGCACGGTTAATTTTCA
AAGTAGCTTTGCTTCTCTGATCCTCAAGAAATAAATTCGAAAGTTCTCAAGACGTTTATCTGATTCTGACTTTTGTAGGAAGACGAACCAAGCTTGGCTTCAAATGTCCG
ATGATTAATGGAAACTAATATTTTTCTTGCAGTAGATTCACCCTTTTCAATTCCAAGAGAATTTAAGTATTTGCACATCTCATCAAATTGTGCAAATCAAAACTTGTTAA
ATTTTACTTTTACTTTTTGTTGGATGCCCAAAGACGAGCCATGCCTGCATCCATGGGTTCATTTGACAAACACAACCATATTTGAATTACCACATCGAGGAATCTTTATC
AATTTTTGTTTGAAGG

Protein sequence

Show/hide protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALES
LDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKLREEAKKAYEEALNIEPRLSNAREALERLSSS

CSPI02G21580 (gene) of Cucumber (PI 183967) v1 genome