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CSPI02G22050 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G22050
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolynucleotide adenylyltransferase
Genome locationChr2:19270988..19271263
RNA-Seq ExpressionCSPI02G22050
SyntenyCSPI02G22050
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0031123 - RNA 3'-end processing (biological process)
GO:0043631 - RNA polyadenylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004652 - polynucleotide adenylyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065055.1 nuclear poly(A) polymerase 4 isoform X3 [Cucumis melo var. makuwa]4.8e-2387.1Show/hide
Query:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
        K LK CMQCFEESGA HFRCLA EPSQLPIFRRWEILCEGTA  VVSG NAIY SKTFNLAV
Subjt:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
KGN62795.1 hypothetical protein Csa_022232 [Cucumis sativus]2.3e-4998.9Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
        MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSG+NAIYTSKTFNLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
TrEMBL top hitse value%identityAlignment
A0A0A0LLH3 Uncharacterized protein1.1e-4998.9Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
        MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSG+NAIYTSKTFNLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
A0A5A7VGN2 Polynucleotide adenylyltransferase2.3e-2387.1Show/hide
Query:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
        K LK CMQCFEESGA HFRCLA EPSQLPIFRRWEILCEGTA  VVSG NAIY SKTFNLAV
Subjt:  KNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCAGCAGTGTTGGGGAAAAAACCTTAAAGACTGCATGCA
ATGCTTTGAAGAATCTGGTGCATTTCATTTTAGATGCCTGGCACTCGAACCTTCACAGCTTCCCATTTTTAGAAGATGGGAGATTCTTTGTGAAGGAACTGCTCATGCGG
TCGTTTCTGGGATGAATGCAATCTACACTTCCAAGACCTTCAATCTTGCAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCAGCAGTGTTGGGGAAAAAACCTTAAAGACTGCATGCA
ATGCTTTGAAGAATCTGGTGCATTTCATTTTAGATGCCTGGCACTCGAACCTTCACAGCTTCCCATTTTTAGAAGATGGGAGATTCTTTGTGAAGGAACTGCTCATGCGG
TCGTTTCTGGGATGAATGCAATCTACACTTCCAAGACCTTCAATCTTGCAGTTTAA
Protein sequenceShow/hide protein sequence
MAWWHGIWFSSNMLFIVLDHGNPKQQCWGKNLKDCMQCFEESGAFHFRCLALEPSQLPIFRRWEILCEGTAHAVVSGMNAIYTSKTFNLAV