; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G22180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G22180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLOB domain-containing protein
Genome locationChr2:19335643..19336189
RNA-Seq ExpressionCSPI02G22180
SyntenyCSPI02G22180
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-5375.69Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN ++AQ  DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]2.1e-5273.51Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR EAAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASN-RRQAQHEDFPFDDPSSGPIFT-----GLSTPAHFSEQLF
        TRAEIA +ASN + Q Q +DF F +P  GP        GLSTPAH     F
Subjt:  TRAEIALLASN-RRQAQHEDFPFDDPSSGPIFT-----GLSTPAHFSEQLF

XP_022923144.1 LOB domain-containing protein 24-like [Cucurbita moschata]1.9e-5375.69Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC+S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN ++AQ  DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]7.1e-5375.86Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASN-RRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN  ++AQ +DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASN-RRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]6.4e-5476.39Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN ++AQ +DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein1.0e-5273.51Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR EAAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASN-RRQAQHEDFPFDDPSSGPIFT-----GLSTPAHFSEQLF
        TRAEIA +ASN + Q Q +DF F +P  GP        GLSTPAH     F
Subjt:  TRAEIALLASN-RRQAQHEDFPFDDPSSGPIFT-----GLSTPAHFSEQLF

A0A0A0LLX6 LOB domain-containing protein3.6e-7999.32Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA
        TRAEIALLASNR+QAQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA
Subjt:  TRAEIALLASNRRQAQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA

A0A1S3AY36 LOB domain-containing protein 24-like5.0e-5272.55Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LRGEAAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASN--RRQAQHEDFPFDDPSSGPIFT-----GLSTPAH-FSEQLF
        TRAEIA +ASN    Q Q +DF F  P  GP        GLS+PAH F+   F
Subjt:  TRAEIALLASN--RRQAQHEDFPFDDPSSGPIFT-----GLSTPAH-FSEQLF

A0A6J1E5I6 LOB domain-containing protein 24-like9.0e-5475.69Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC+S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN ++AQ  DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASNRRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

A0A6J1JCD0 LOB domain-containing protein 24-like3.4e-5375.86Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASN-RRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF
        TRAEIA LASN  ++AQ +DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIALLASN-RRQAQHEDF---PFDDPSS-GPIFTGLSTPAHF

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 233.0e-3860Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF
        T+AEIA+  +   Q    DF
Subjt:  TRAEIALLASNRRQAQHEDF

P59468 LOB domain-containing protein 242.7e-3960.83Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF
        T+AEIA+  +   Q Q+ DF
Subjt:  TRAEIALLASNRRQAQHEDF

Q8LBW3 LOB domain-containing protein 123.3e-2947.97Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CA+CK LRRRC+ +CIF+PYFP ++P +FAIVH+++GASNV+K LQ++P+  R +A  +L FEA  R+ DP+YGCVG IS LQ ++   + QLA  +A
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIALLASNRR---QAQHEDFPFD
        EI  +        Q+ H+    D
Subjt:  EIALLASNRR---QAQHEDFPFD

Q9FKZ3 LOB domain-containing protein 363.1e-2749.51Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CAACK+LRR+C+  C+F+PYFP + PQ+FA VH+++GASNVAK L ++  + R +A  +L++EA+ R+ DP+YGCVG+IS LQ+ L      L   + 
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIA
        E+A
Subjt:  EIA

Q9SHE9 LOB domain-containing protein 42.7e-3151.16Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CAACK LRRRC+ +C+FSPYFP++ PQ+FA VHR++GASNV K LQ++P+  RG+A  ++ +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +A
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIALLASNRRQAQHEDFPF-----DDPSS
        E+  L    R  Q  +FP      D PSS
Subjt:  EIALLASNRRQAQHEDFPF-----DDPSS

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 41.9e-3251.16Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CAACK LRRRC+ +C+FSPYFP++ PQ+FA VHR++GASNV K LQ++P+  RG+A  ++ +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +A
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIALLASNRRQAQHEDFPF-----DDPSS
        E+  L    R  Q  +FP      D PSS
Subjt:  EIALLASNRRQAQHEDFPF-----DDPSS

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein2.4e-3047.97Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CA+CK LRRRC+ +CIF+PYFP ++P +FAIVH+++GASNV+K LQ++P+  R +A  +L FEA  R+ DP+YGCVG IS LQ ++   + QLA  +A
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIALLASNRR---QAQHEDFPFD
        EI  +        Q+ H+    D
Subjt:  EIALLASNRR---QAQHEDFPFD

AT3G26620.1 LOB domain-containing protein 232.1e-3960Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF
        T+AEIA+  +   Q    DF
Subjt:  TRAEIALLASNRRQAQHEDF

AT3G26660.1 LOB domain-containing protein 241.9e-4060.83Show/hide
Query:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK
        M P RCAACKYLRRRC  +C+FSPYFP N+PQ+FA VHRIYGA NV+K LQQ+P   R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAK
Subjt:  MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAK

Query:  TRAEIALLASNRRQAQHEDF
        T+AEIA+  +   Q Q+ DF
Subjt:  TRAEIALLASNRRQAQHEDF

AT5G66870.1 ASYMMETRIC LEAVES 2-like 12.2e-2849.51Show/hide
Query:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA
        S CAACK+LRR+C+  C+F+PYFP + PQ+FA VH+++GASNVAK L ++  + R +A  +L++EA+ R+ DP+YGCVG+IS LQ+ L      L   + 
Subjt:  SRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRA

Query:  EIA
        E+A
Subjt:  EIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCAAGTCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCATCAAATTGCATTTTCTCTCCTTATTTTCCCTCAAACAATCCTCAAAGATTCGCCATTGT
TCATAGAATCTATGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATCTACGAGGTGAAGCAGCAGAGACTTTGTATTTTGAAGCAAAATGTAGAATTG
AAGATCCAATTTACGGATGTGTTGGGATTATTTCCCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTCTCCTCGCTTCC
AACCGTCGACAAGCCCAACACGAAGACTTTCCATTTGATGACCCCAGCTCAGGCCCAATTTTTACTGGGCTTTCCACTCCAGCCCACTTTTCTGAGCAATTGTTTCGTGC
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCCAAGTCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCATCAAATTGCATTTTCTCTCCTTATTTTCCCTCAAACAATCCTCAAAGATTCGCCATTGT
TCATAGAATCTATGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATCTACGAGGTGAAGCAGCAGAGACTTTGTATTTTGAAGCAAAATGTAGAATTG
AAGATCCAATTTACGGATGTGTTGGGATTATTTCCCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTCTCCTCGCTTCC
AACCGTCGACAAGCCCAACACGAAGACTTTCCATTTGATGACCCCAGCTCAGGCCCAATTTTTACTGGGCTTTCCACTCCAGCCCACTTTTCTGAGCAATTGTTTCGTGC
TTAG
Protein sequenceShow/hide protein sequence
MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLAS
NRRQAQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA