; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G22280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G22280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranslation initiation factor IF-2
Genome locationChr2:19422103..19426195
RNA-Seq ExpressionCSPI02G22280
SyntenyCSPI02G22280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62818.1 hypothetical protein Csa_022087 [Cucumis sativus]1.5e-87100Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

XP_004150287.1 uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus]1.5e-87100Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

XP_008445018.1 PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo]4.3e-8798.92Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

XP_031736856.1 uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus]4.0e-8594.87Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEF          WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

XP_038885128.1 uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida]1.4e-7792.97Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSD K TLSKLKPDGGSRLKLESSDHKKKIDSSIKNSI SSKHKS+SLVTK+EVKSKTISSSSKTTTKTTTTTT TAKVREKKVFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAY+KKLRRQKEQRTGTPIK  SAKP SRPESSQ+PQ PSKNGD+KAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LLY4 Uncharacterized protein7.1e-88100Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

A0A1S3BCG5 uncharacterized protein LOC103488185 isoform X12.1e-8798.92Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

A0A6J1BR23 uncharacterized protein LOC111004987 isoform X14.3e-6177.66Show/hide
Query:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ K+EVKSK  SSSSKTT+KTTTTTT T KVREKKV+NL GQKYDPPE
Subjt:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKK
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X14.6e-6380.32Show/hide
Query:  MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE
        MVSDPK T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ K+EVKSKTI+SSSKTTTK    TT+TAKVREKKVFNL GQKYDPPE
Subjt:  MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        EREPLRIFYESLSKQI  SEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ PSKNGD+KAKKK
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

A0A6J1K794 uncharacterized protein LOC1114917881.6e-6381.38Show/hide
Query:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE
        MVS+PK T+SK KP   DGGSRL         KIDSSIKNS PSSKHKSVS+VTK+EVKSKT SSSS+ TTKTTTT T TAKVREKKV+NLPGQK DPPE
Subjt:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK
        EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S K LS+PESSQRPQ PSKNGD+KAK+K
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19990.1 unknown protein3.1e-1941.04Show/hide
Query:  STLSKLKPDGGS-----RLKLESSDHKKKIDSSIKNSIPSSKHKSVSLV-------TKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYD
        S+ +K KP  G+     +LK E +D     +  IK+S+  S+ K V           K  V  +  S       K         K RE+KV++LPGQK +
Subjt:  STLSKLKPDGGS-----RLKLESSDHKKKIDSSIKNSIPSSKHKSVSLV-------TKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYD

Query:  PPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPES
         P+ER+PLRIFYESL KQIP S+MA+ W+ME G+L  EKAKK  EKKL  QK  +  +P+KSA++ P S  +S
Subjt:  PPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPES

AT5G11600.1 unknown protein1.9e-2947.31Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE
        + +  +  +S  KP          S+ K K+  +   +I ++   +  +  KA+  S  +S     TT  T +       REKKV++L GQK+DPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNG-DIKAKKK
        PLRIFYESLSKQIP SEMAEFW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KSA     S+ ESSQR      NG D + KKK
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNG-DIKAKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCCGATGGCGGCTCCAGGTTAAAGCTTGAATCCTCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAA
CTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAAGCCGAGGTAAAGTCAAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTA
CTACTGCTACTGCTAAAGTGAGAGAAAAGAAAGTCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAACCGCTTCGGATCTTCTACGAGTCCTTGTCA
AAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGA
ACAGAGAACCGGGACTCCGATTAAATCAGCATCAGCAAAACCCTTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGA
AAAAATCGTGA
mRNA sequenceShow/hide mRNA sequence
TGCTCATCGTCGGCTAAATTGCAGTTAAAAAACGAGAAAAACCATTTTTAATTAGCGAAATGTTGATTGATTGATGCTTTTCGTTTTCGGTTTCGGTTTCTTCTACGTTT
ATTTTTATTATTATTATTATCTTATTCTCAAGCAGTTGGAAGAATTGAGATTAGATTATCTTCTGTGTAGGAAGAAGGAAGACGGGAGGAAGAGGAAGAAGAAGATTGAT
TCTTCTGATAAATTTTCTAAATTATTAAACCACAAAAAAAAAAACCCATTATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCCGATGGCGGCTCCAGGTTA
AAGCTTGAATCCTCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAACTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAAGCCGAGGTAAAGTC
AAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTACTACTGCTACTGCTAAAGTGAGAGAAAAGAAAGTCTTTAATTTGCCTGGTCAGAAATATG
ATCCACCTGAAGAGAGAGAACCGCTTCGGATCTTCTACGAGTCCTTGTCAAAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCT
CCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGAACAGAGAACCGGGACTCCGATTAAATCAGCATCAGCAAAACCCTTGAGCAGACCAGAGAG
TTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGAAAAAATCGTGAACGATAGCGACGACGATGACGACTTCATTTTAAGCCCCAAAAGAAGAAA
AATGTAGGAAAAAGCACGTTGATAACCTTTTCTTTTCTTTTCTTTATTAGCATACTTTACAAGGAATTACTTGATTAAATTTCCTTAGAGTTTAACTGCAAAACTACAGA
GATGATCATAACCCAACAGTATTTACCAGGACATTCTTTTATGCTCAACAACCTGTGTATGAACAATAATTTAAGGAGAGACAAGTTTATGGTTCAAATCCTTTTCATAT
AATGCTTAATTTCCCTCCTTTTCCTTTCTGATAGATTCTACA
Protein sequenceShow/hide protein sequence
MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKSKTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLS
KQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKS