; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G22290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G22290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionexosome complex exonuclease RRP46 homolog
Genome locationChr2:19431799..19434977
RNA-Seq ExpressionCSPI02G22290
SyntenyCSPI02G22290
Gene Ontology termsGO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0006259 - DNA metabolic process (biological process)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0004540 - ribonuclease activity (molecular function)
GO:0004536 - deoxyribonuclease activity (molecular function)
GO:0004527 - exonuclease activity (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150286.1 exosome complex exonuclease RRP46 homolog [Cucumis sativus]3.3e-13299.18Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPM+SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

XP_008445020.1 PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis melo]4.8e-13198.35Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVPEGSTQGVGEPLEHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

XP_022951618.1 exosome complex exonuclease RRP46 homolog [Cucurbita moschata]6.7e-12593Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+PEGSTQ  GEPLE+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

XP_023002484.1 exosome complex exonuclease RRP46 homolog [Cucurbita maxima]1.5e-12493Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+PEGSTQ  GEPLE+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

XP_023538111.1 exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo]7.4e-12492.18Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        ME+DRDDGRT NQLRPLACSCNVLNRA+GSASWSQGDTK+LAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+PEGSTQ  GEPLE+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ9 Uncharacterized protein1.6e-13299.18Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPM+SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

A0A1S3BB90 exosome complex exonuclease RRP46 homolog2.3e-13198.35Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVPEGSTQGVGEPLEHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

A0A5A7VGL5 Exosome complex exonuclease RRP46-like protein2.3e-13198.35Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVPEGSTQGVGEPLEHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

A0A6J1GI69 exosome complex exonuclease RRP46 homolog3.2e-12593Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+PEGSTQ  GEPLE+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

A0A6J1KQK5 exosome complex exonuclease RRP46 homolog7.2e-12593Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVY PKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+PEGSTQ  GEPLE+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

SwissProt top hitse value%identityAlignment
Q84T68 Exosome complex exonuclease RRP46 homolog6.8e-8063.87Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        ME  R DGR PNQLRP +C+ N L+RAHGSA W+QGDT VLAAVY PK GT+K ENPEKASIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT +PNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+ +DG+LLPCAINA CAALV AGIPLKHLAVAI C + E+G VILD  K EE+++K+  HLVFPN+  S   +   Q   E  E G+ITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMD
         G MS +DY  C+ERG AA++++S F+R +LQ Q P D
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMD

Q9CRA8 Exosome complex component RRP465.3e-3235.62Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VY P       E   KA++EVI +PK G  G  E+  E +++ T +++ +   +P T+ ++++QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCL
        +LL C +NA+C ALVDAG+P++ L   ++C L  +G ++LDPT  +E++ +A +     +A                 E  ++ S T+G  S  +   CL
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCL

Query:  ERGRAATTKMSAFLRRSLQ
           +AA+  +  F R SLQ
Subjt:  ERGRAATTKMSAFLRRSLQ

Q9LX74 Exosome complex exonuclease RRP46 homolog5.7e-10374.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

Q9NQT4 Exosome complex component RRP461.4e-3235.62Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VY P       E   KA++EVI +PK G  G  E+  E +++ T +++ + T +P T+ ++++QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCL
        +LL C +NA+C ALVDAG+P++ L   ++C L  +G ++LDPT  +E++ +A +                     + +E  ++ S T+G  S  +   CL
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCL

Query:  ERGRAATTKMSAFLRRSLQ
           +AA+  +  F R SLQ
Subjt:  ERGRAATTKMSAFLRRSLQ

Q9SP08 Exosome complex component RRP41 homolog8.5e-1430.06Show/hide
Query:  RDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL
        R DGR  N++R +     V+++A GSA +  G+TKV+AAVY P+    K++  +     V+ +    Q    +R          E  +++++T+++  + 
Subjt:  RDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL

Query:  TTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASV
           P++   I +QV+  DG      INA+  AL DAGIP++ LAV+ S     N   +LD   +E+    A V
Subjt:  TTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASV

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

AT3G46210.3 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

AT3G46210.4 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG

AT3G46210.5 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.49Show/hide
Query:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVY PKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+   GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF R++ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGACAGAGATGATGGTCGTACCCCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGA
TACGAAGGTTCTTGCTGCTGTCTATGAACCTAAAGCTGGAACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCTAAGACAGGGCAAATTG
GAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCAT
GATGATGGAGCTCTTCTTCCTTGTGCTATTAACGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCGTGTTGTTTGTCTGA
GAATGGATATGTTATTTTGGATCCAACCAAGATAGAGGAGGAGAAAATGAAGGCCTCTGTGCATTTGGTCTTCCCAAATGCACCTGTCTCAGTAGTTCCTGAAGGATCTA
CACAAGGTGTAGGTGAACCACTGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGACGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACT
ACAAAAATGTCTGCTTTTCTGAGGAGAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTT
CCTCGCTCCATCGCAAGAAACTTAAAACCGACTGAGTTTGATTTCATCTTATCGTCTTCTTCTCCTTTATAATATTTCGAAACCACCGGAGAAAAGACCATGGAGATAGA
CAGAGATGATGGTCGTACCCCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGATACGAAGGTTC
TTGCTGCTGTCTATGAACCTAAAGCTGGAACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCTAAGACAGGGCAAATTGGAAAACTGGAA
AGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCATGATGATGGAGC
TCTTCTTCCTTGTGCTATTAACGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCGTGTTGTTTGTCTGAGAATGGATATG
TTATTTTGGATCCAACCAAGATAGAGGAGGAGAAAATGAAGGCCTCTGTGCATTTGGTCTTCCCAAATGCACCTGTCTCAGTAGTTCCTGAAGGATCTACACAAGGTGTA
GGTGAACCACTGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGACGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACTACAAAAATGTC
TGCTTTTCTGAGGAGAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA
Protein sequenceShow/hide protein sequence
MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYEPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIH
DDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAAT
TKMSAFLRRSLQPQLPMDSSKAG