CuGenDBv2

Gene ID	CSPI02G22790
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cwf21 domain-containing protein
Genome location	Chr2:19798157..19798390
RNA-Seq Expression	CSPI02G22790
Synteny	CSPI02G22790
Gene Ontology terms	NA
InterPro domains	IPR013170 - mRNA splicing factor Cwf21 domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0064984.1 dentin sialophosphoprotein-like [Cucumis melo var. makuwa]

5.8e-06

66.67

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLND  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

XP_004138875.1 dentin sialophosphoprotein [Cucumis sativus]

1.7e-05

64.71

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLN+  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

XP_008445109.1 PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]

5.8e-06

66.67

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLND  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

XP_038884129.1 serine/arginine repetitive matrix protein 2-like [Benincasa hispida]

2.2e-05

60.71

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETLRNKMD
        + P EDILEH+ KR IELKL+ILEDKL D  Y      KISEKLRE RETL   ++
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETLRNKMD

XP_038884695.1 dentin sialophosphoprotein-like [Benincasa hispida]

2.2e-05

66.67

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKL D  Y +    +ISEKLREARETL
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ00 cwf21 domain-containing protein

8.2e-06

64.71

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLN+  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

A0A1S3BBX0 dentin sialophosphoprotein-like

2.8e-06

66.67

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLND  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

A0A5A7VCH8 Dentin sialophosphoprotein-like

2.8e-06

66.67

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKLND  Y     ++ISEKLREARE L
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

A0A6J1ESM6 dentin sialophosphoprotein-like

5.3e-05

62.75

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKL D  Y      +IS+KL+EARETL
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

A0A6J1K7B6 dentin sialophosphoprotein-like

5.3e-05

62.75

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Query:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        K P +DILEH+ KR IELKL+ILEDKL D  Y      +IS+KL+EARETL
Subjt:  KAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49601.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

3.7e-06

54.72

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Query:  LLKAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL
        L K P + ILEH+ KR I LKL ILEDKL D  Y+ I+   I++KL EAR +L
Subjt:  LLKAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETL

Sequences

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CDS sequence

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ATGGAAAGGTTGCTGAAAGCACCAGAGGAAGACATTCTCGAGCATAACCACAAGCGTGGGATTGAACTCAAACTTCTCATACTTGAGGACAAGCTCAATGATGGCCAATA
TAATGCTATACAGAGAAGGAAAATTTCTGAAAAGTTGAGGGAAGCTCGCGAGACTTTGAGGAACAAGATGGATCCTCTGCCATTGTTCTTGGAGGAAAAGATGGATCCAA
TAACCCGCTTTTAA

mRNA sequence

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Protein sequence

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MERLLKAPEEDILEHNHKRGIELKLLILEDKLNDGQYNAIQRRKISEKLREARETLRNKMDPLPLFLEEKMDPITRF

CSPI02G22790 (gene) of Cucumber (PI 183967) v1 genome