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CSPI02G23280 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G23280
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUPF0481 protein At3g47200-like
Genome locationChr2:20154165..20154551
RNA-Seq ExpressionCSPI02G23280
SyntenyCSPI02G23280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064942.1 UPF0481 protein [Cucumis melo var. makuwa]9.3e-2560.66Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI TEKDV+LL   +II+NDI  SD+EV +LFNN  KFV+ S + N     FND SKAL +H DRRWNK KASLKHNYFNT WA+I V A TF++VL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHFLVKIYPTSP
        T LQTIF+    F  K  P++P
Subjt:  TRLQTIFAIFIHFLVKIYPTSP

KAA0064948.1 UPF0481 protein [Cucumis melo var. makuwa]8.7e-2362.04Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MD +I TEKDV +L N E+IVN+I  SDKEV ELFNN  KF+N S +IN+   +FN ISKAL +H + RWNK KASLKHNYFNT WA I  FA +F+++L
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFA
        T LQTIF+
Subjt:  TRLQTIFA

XP_008445188.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]1.9e-2561.48Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLIITEKDV+LL   +II+NDI  SD+EV +LFNN  KFV+ S + N     FND SKAL +H DRRWNK KASLKHNYFNT WA+I V A TF++VL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHFLVKIYPTSP
        T LQTIF+    F  K  P++P
Subjt:  TRLQTIFAIFIHFLVKIYPTSP

XP_011649818.1 UPF0481 protein At3g47200 [Cucumis sativus]1.1e-3373.45Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI TEKDVSLLE   IIVNDI  S KEV +LFNN  KFVNRS + + YF++F  ISKALCEHRDRRWNKLKASLKHNYFNT WASI VFA T +IVL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T LQTIFA+   F
Subjt:  TRLQTIFAIFIHF

XP_016899969.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]9.6e-3882.41Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI  EKDVSLLE   IIVNDI  SDKEV ELFNN  KFVNRS DI+AYFE+FN ISKALCEHRDRRWNKLKASLKHNYFNT WA I VFA TFIIVL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFA
        T LQTIFA
Subjt:  TRLQTIFA

TrEMBL top hitse value%identityAlignment
A0A0A0K2S5 Uncharacterized protein4.4e-2868.38Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQ-FNDISKALCE-HRDRRWNKLKA-SLKHNYFNTLWASIFVFATTFI
        MD LI T+KDV LLE   IIVNDI  SDKEV ELFNN  KFV RSSDI+AYFE+ FN ISKALCE +R+R+W KLK  SLKHNYFNT WA I +F  TFI
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQ-FNDISKALCE-HRDRRWNKLKA-SLKHNYFNTLWASIFVFATTFI

Query:  IVLTRLQTIFAIFIHFL
        I+LT LQTIF++   FL
Subjt:  IVLTRLQTIFAIFIHFL

A0A0A0LQ64 Uncharacterized protein5.3e-3473.45Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI TEKDVSLLE   IIVNDI  S KEV +LFNN  KFVNRS + + YF++F  ISKALCEHRDRRWNKLKASLKHNYFNT WASI VFA T +IVL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T LQTIFA+   F
Subjt:  TRLQTIFAIFIHF

A0A1S3BBL9 UPF0481 protein At3g47200-like9.1e-2661.48Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLIITEKDV+LL   +II+NDI  SD+EV +LFNN  KFV+ S + N     FND SKAL +H DRRWNK KASLKHNYFNT WA+I V A TF++VL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHFLVKIYPTSP
        T LQTIF+    F  K  P++P
Subjt:  TRLQTIFAIFIHFLVKIYPTSP

A0A1S4DVF8 UPF0481 protein At3g47200-like4.6e-3882.41Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI  EKDVSLLE   IIVNDI  SDKEV ELFNN  KFVNRS DI+AYFE+FN ISKALCEHRDRRWNKLKASLKHNYFNT WA I VFA TFIIVL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFA
        T LQTIFA
Subjt:  TRLQTIFA

A0A5A7VCD8 UPF0481 protein4.6e-3882.41Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MDYLI  EKDVSLLE   IIVNDI  SDKEV ELFNN  KFVNRS DI+AYFE+FN ISKALCEHRDRRWNKLKASLKHNYFNT WA I VFA TFIIVL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFA
        T LQTIFA
Subjt:  TRLQTIFA

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472003.2e-0431.19Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        M  L+  E+DV+ L N ++I+ +   S+ EV E F    K V    D +      N++ K + E+  + +N L A  +H +F + W  +   A  F+I+L
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAI
        T LQ+  AI
Subjt:  TRLQTIFAI

Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)5.5e-0733.63Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MD LI + +DVS L    II + +  SD EV +LFN   + V   ++ ++Y  +   +S  +  + D +WN  +A+LKH YFN  WA +   A   ++VL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T  Q+ +A++ ++
Subjt:  TRLQTIFAIFIHF

AT3G50130.1 Plant protein of unknown function (DUF247)1.9e-0737.17Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MD LI + +DV  L    II + +  +D EV +LFN   + V      N+Y  Q   +S  +  +  R+WN LKA LKH YFN  WA    FA   ++VL
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T  Q+ F  + +F
Subjt:  TRLQTIFAIFIHF

AT3G50140.1 Plant protein of unknown function (DUF247)5.5e-0732.74Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MD LI + +D+  L   +II + +  +D EV ++FN   + V    + N Y    +++S  +  + +R+WN LKA+LKH YF+  WA    FA   +++L
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T  Q+ F  + +F
Subjt:  TRLQTIFAIFIHF

AT3G50150.1 Plant protein of unknown function (DUF247)2.5e-0735.4Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL
        MD LI + +DVS L +  II + +  SD EV +LFN   K V      + Y  Q   +S+ +  +  R+WN LKA+L+  YFN  WA     A   ++ L
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVL

Query:  TRLQTIFAIFIHF
        T  Q+ FA++ ++
Subjt:  TRLQTIFAIFIHF

AT3G50160.1 Plant protein of unknown function (DUF247)1.0e-0834.96Show/hide
Query:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFV----------NRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIF
        MD LI + +DVS L +  II N +  SD EV +LFN  GK V            + ++N Y+               R+WN LKA+L+H YFN  WA   
Subjt:  MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFV----------NRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIF

Query:  VFATTFIIVLTRLQTIFAIFIHF
          A   +++ T  Q+ FA+F +F
Subjt:  VFATTFIIVLTRLQTIFAIFIHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATTTGATAATCACAGAGAAAGACGTGAGTTTACTTGAGAATGTTGAAATCATAGTGAACGACATCAGTGATAGCGATAAAGAAGTTTTAGAATTGTTTAACAA
TTTCGGTAAATTTGTGAATAGGTCAAGTGATATTAATGCGTATTTTGAGCAATTCAACGATATTAGCAAAGCTTTATGTGAGCATCGTGACAGACGGTGGAACAAGTTGA
AAGCTTCGTTGAAACATAACTATTTCAATACGTTGTGGGCTAGTATCTTCGTCTTTGCTACAACCTTCATTATTGTTCTCACTCGCCTTCAAACAATATTTGCTATTTTT
ATCCACTTTCTGGTCAAAATCTATCCTACGTCTCCATTTGTCTGTTTTGTCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTATTTGATAATCACAGAGAAAGACGTGAGTTTACTTGAGAATGTTGAAATCATAGTGAACGACATCAGTGATAGCGATAAAGAAGTTTTAGAATTGTTTAACAA
TTTCGGTAAATTTGTGAATAGGTCAAGTGATATTAATGCGTATTTTGAGCAATTCAACGATATTAGCAAAGCTTTATGTGAGCATCGTGACAGACGGTGGAACAAGTTGA
AAGCTTCGTTGAAACATAACTATTTCAATACGTTGTGGGCTAGTATCTTCGTCTTTGCTACAACCTTCATTATTGTTCTCACTCGCCTTCAAACAATATTTGCTATTTTT
ATCCACTTTCTGGTCAAAATCTATCCTACGTCTCCATTTGTCTGTTTTGTCTTTTAA
Protein sequenceShow/hide protein sequence
MDYLIITEKDVSLLENVEIIVNDISDSDKEVLELFNNFGKFVNRSSDINAYFEQFNDISKALCEHRDRRWNKLKASLKHNYFNTLWASIFVFATTFIIVLTRLQTIFAIF
IHFLVKIYPTSPFVCFVF