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CSPI02G23340 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G23340
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein brittle-1
Genome locationChr2:20195193..20195659
RNA-Seq ExpressionCSPI02G23340
SyntenyCSPI02G23340
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652200.1 hypothetical protein Csa_022279 [Cucumis sativus]1.8e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
XP_004138732.1 uncharacterized protein LOC101218289 isoform X1 [Cucumis sativus]1.8e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
XP_008445193.1 PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo]2.4e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
XP_016900009.1 PREDICTED: uncharacterized protein LOC103488297 isoform X3 [Cucumis melo]2.4e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
XP_031736431.1 uncharacterized protein LOC101218289 isoform X2 [Cucumis sativus]1.8e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
TrEMBL top hitse value%identityAlignment
A0A0A0LMA1 Uncharacterized protein1.3e-31100Show/hide
Query:  MCFHFLRIKGSSVEGKDYGRNRLGKAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQSQY
        MCFHFLRIKGSSVEGKDYGRNRLGKAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQSQY
Subjt:  MCFHFLRIKGSSVEGKDYGRNRLGKAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQSQY
A0A0A0LMA7 Uncharacterized protein8.9e-1292.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
A0A1S3BCZ0 uncharacterized protein LOC103488297 isoform X41.2e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
A0A1S4DVJ9 uncharacterized protein LOC103488297 isoform X31.2e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
A0A5A7VF29 Uncharacterized protein1.2e-1192.86Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        KAVYVYPTMIL VICAFSSVKYDVKKV RGAPARPIAKP QS
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11280.1 unknown protein2.0e-1169.05Show/hide
Query:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS
        K VYVYPTM+L +ICAFS +KYD++K  R APARPIAKP  S
Subjt:  KAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTCCACTTCTTGCGAATTAAGGGCTCTTCTGTAGAAGGAAAGGATTATGGAAGGAATCGGCTTGGGAAAGCTGTTTATGTTTATCCTACAATGATTCTCACTGT
GATCTGTGCTTTCTCATCGGTTAAATATGATGTGAAGAAGGTTCCTAGAGGTGCCCCTGCTCGACCAATTGCAAAGCCACCTCAAAGCCAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTCCACTTCTTGCGAATTAAGGGCTCTTCTGTAGAAGGAAAGGATTATGGAAGGAATCGGCTTGGGAAAGCTGTTTATGTTTATCCTACAATGATTCTCACTGT
GATCTGTGCTTTCTCATCGGTTAAATATGATGTGAAGAAGGTTCCTAGAGGTGCCCCTGCTCGACCAATTGCAAAGCCACCTCAAAGCCAATATTAA
Protein sequenceShow/hide protein sequence
MCFHFLRIKGSSVEGKDYGRNRLGKAVYVYPTMILTVICAFSSVKYDVKKVPRGAPARPIAKPPQSQY