; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G23860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G23860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr2:20470477..20472323
RNA-Seq ExpressionCSPI02G23860
SyntenyCSPI02G23860
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064894.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]5.5e-16099.64Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_004138706.1 probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]1.1e-160100Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_008445257.1 PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]3.6e-15999.27Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]4.9e-14891.24Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+R+IVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]3.1e-15596.35Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWN NLEEEFALIR+IVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNIC+DIYASDSIELLRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP+TQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease5.4e-161100Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A1S3BD02 Poly(A)-specific ribonuclease1.7e-15999.27Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A5A7VC99 Poly(A)-specific ribonuclease2.7e-16099.64Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease2.4e-14891.24Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+R+IVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease2.4e-14891.24Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+R+IVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 75.0e-7953.73Show/hide
Query:  SINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S  I EVW  NL+EE   IR ++ ++NY+AMDTEFPGVV RP+G F++  +Y Y+ LR NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  CDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCN
         +D+YA DSIELL   GI F+K  EEGI+   F ELLM+SG+VL + + W++FHSGYDFGYL+K+LT  NLPE + +FF+++ ++FP++YD+K+LM+ C 
Subjt:  CDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCN

Query:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN
        +  GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG  +    N
Subjt:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLGVETGQTTN

Q9LEU4 Probable CCR4-associated factor 1 homolog 102.0e-12075.75Show/hide
Query:  KGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW+ NL EEFALIR+IVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTL+ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR
        FNI +DIYAS+SIELLR+CGIDF+K  E+GIDV RFGEL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.5e-9462.12Show/hide
Query:  ESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + V +  N N      EYNY TL+ NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNIN------EYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIK
        NFREFN+  D++A DSIELLR+  ID +K +E G+D  RF ELLM SG+VLND I WVTFH GYDFGYLLKLL+ + LPE  ++FFD +  +FP+VYDIK
Subjt:  NFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIK

Query:  HLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.2e-12073.06Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIRD+VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.7e-12274.63Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWNDNLE E ALIR++VD F ++AMDTEFPG+V RPVG+FK   EY+Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD
        QFNFREF++  DIYA+DSIELLR+ GIDF K +E GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLPETQ  FF++I +YFP VYD
Subjt:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-12273.06Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIRD+VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-12273.06Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIRD+VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-12073.13Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWNDNL+EE  LIRD+VD F Y+AMDTEFPG+VVRPVG+FK+  +Y+Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI
        FNFREF++  DI+A DSIELL++ GID  K   +GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLP++Q +FF LI++YFP VYDI
Subjt:  FNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDI

Query:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE
        KHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE
Subjt:  KHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-12374.63Show/hide
Query:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWNDNLE E ALIR++VD F ++AMDTEFPG+V RPVG+FK   EY+Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD
        QFNFREF++  DIYA+DSIELLR+ GIDF K +E GID  RF ELLMSSGIVLN+N+ WVTFHSGYDFGYLLKLLTC+NLPETQ  FF++I +YFP VYD
Subjt:  QFNFREFNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYD

Query:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-12175.75Show/hide
Query:  KGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW+ NL EEFALIR+IVD+F+YIAMDTEFPGVV++PV +FK  N+ NYRTL+ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR
        FNI +DIYAS+SIELLR+CGIDF+K  E+GIDV RFGEL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+FF L+++YFP VYDIKHLM 
Subjt:  FNICDDIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMR

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGTGAGGTGTGGAACGATAATTTGGAGGAAGAATTTGCTCTTATACGTGATATTGTCGACCAGTTTAACTACAT
AGCGATGGACACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTTAAGAATATTAATGAGTATAACTACCGAACCCTCAGAGAGAATGTTGATACCTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTTGTGAT
GATATTTATGCAAGTGATTCAATTGAGCTTTTGCGCGAGTGTGGTATTGATTTTCAGAAGACCCATGAGGAGGGAATTGATGTCAATCGCTTTGGTGAGCTTCTCATGTC
ATCTGGGATTGTGTTAAACGACAATATTTTTTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGTTGAAATTGTTGACTTGCCGAAACTTACCAGAGACCCAGG
CCGAATTTTTTGATTTGATCCATATGTACTTTCCGATGGTCTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGTTGAACAAGCTTGCAGAGTTA
CTAGAAGTGGAGAGGATTGGAGTGTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGTTCTACACAGAA
ATATGCAGGTGTTTTATACGGTCTTGGTGTTGAAACTGGACAGACTACCAATTGA
mRNA sequenceShow/hide mRNA sequence
AAACAGCTGAAAGGATAAGAATTGATTTTTGAAAAAAAAAAACGAAAAGAAAAATGAAACAATTATTGTGGGAAGGGAAAAAAGAGTAAGAAGATAGCCCAAAGGGAAAT
GCGAACGGCGTCGTATAAGGGAAAACGACATGGTTTGGGAGGTGTGTGTGAATCCATTCATCATCGTCATGTTGGTGATGATACCGGGATGAAGCAAAATTTAGGGCGGG
TCGAAGCGGAGCTCTCATCCCCATTTGTTTGTGTGCTCCATTGCCTCTCCGTCCAACACTTCTCTGCCTTTTAAGATCTCTCTGTTTCAATTCCTTCAAGGTTAGATCCC
TTCGCCTCACTCTTGGAGGGGGTTTCTCCCCCCATTTCCCCCTCGATTCTTTTTCCTTTTCCTTTTCCTTTTCTTTATCATCTAGGGTTCTATCCAATCCTCACTCTCTT
TCTTTTCTGCTTCACTCTCCCCCTGATCTTCTAGATCCAGGAAGATTTCAATTCTTTCTCACGGCCCCACGTTACCTTTCAAGGGCCAAACCCCGAACCCCTTTTCTTGT
TTTTCTTTTATTTTCCCCATTTCTTGTTCTTGGGGGTTTTTTCTCTCTTTTGCCATTTTGTTGGTTTTGTTGACGTTCGAGGTATGTCGATTTTGCCGAAAGGTGAATCG
ATTAATATCCGTGAGGTGTGGAACGATAATTTGGAGGAAGAATTTGCTCTTATACGTGATATTGTCGACCAGTTTAACTACATAGCGATGGACACCGAGTTCCCTGGCGT
GGTTGTTCGTCCTGTGGGTTCTTTTAAGAATATTAATGAGTATAACTACCGAACCCTCAGAGAGAATGTTGATACCTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTG
ATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGTATTTGGCAGTTCAATTTCCGCGAGTTCAATATTTGTGATGATATTTATGCAAGTGATTCAATTGAG
CTTTTGCGCGAGTGTGGTATTGATTTTCAGAAGACCCATGAGGAGGGAATTGATGTCAATCGCTTTGGTGAGCTTCTCATGTCATCTGGGATTGTGTTAAACGACAATAT
TTTTTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGTTGAAATTGTTGACTTGCCGAAACTTACCAGAGACCCAGGCCGAATTTTTTGATTTGATCCATATGT
ACTTTCCGATGGTCTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGTTGAACAAGCTTGCAGAGTTACTAGAAGTGGAGAGGATTGGAGTGTGC
CATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATACGGTCTTGG
TGTTGAAACTGGACAGACTACCAATTGAAGACACTTCAAGTGTTTGTAGCATTGTGAAACTTGGTTAAAGCATTGATGGTTGTATCTGTTTTTCTTTTTCGCTTGTAAAT
TATGGCAGTTGGCAGTTAGTATTTCAATAAAACCTTAATGGCACTCTTTCAGTTAGTTAACTTGTTTTGTTAGATGCAATGCTATATTTTACGTGCCTTTCCATTCAAAT
CTGTTATACGTCAAAGATAGATGGATGAATACAATAGTGGTGGCAATATAGAACATATTTCTTGAGATACTGTGTGCCTTATTATTTGATTTCTGAAATTAAATTTTCTT
CAATTGGCCTGTTGCTATGACCATTCATTCTTCTTCCCGTTGATGCCGCCATATCTATACCAACTACTGACGATTGTTTGACAAGAC
Protein sequenceShow/hide protein sequence
MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICD
DIYASDSIELLRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN