; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G23870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G23870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr2:20476119..20477670
RNA-Seq ExpressionCSPI02G23870
SyntenyCSPI02G23870
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064893.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]5.5e-16099.64Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

XP_004138704.1 probable CCR4-associated factor 1 homolog 7 [Cucumis sativus]2.5e-160100Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

XP_008445259.1 PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]5.5e-16099.64Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

XP_022996818.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima]4.0e-15093.8Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GN PTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]3.7e-15696.72Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNINDFNYRTLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIG+DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease1.2e-160100Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

A0A1S3BD45 Poly(A)-specific ribonuclease2.7e-16099.64Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

A0A5A7V9Q6 Poly(A)-specific ribonuclease2.7e-16099.64Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

A0A6J1HCG0 Poly(A)-specific ribonuclease7.3e-15093.8Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNI SDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

A0A6J1KC39 Poly(A)-specific ribonuclease1.9e-15093.8Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE+GN PTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP  Q GFF+LINVYFPV+YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 79.1e-8155.39Show/hide
Query:  SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNI
        S +I EVW  NL+EE   IR ++ K+NY+AMDTEFPGVV RP+G F++  D+ Y+ L+ NV++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNI

Query:  GSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMKFCN
          D++A DSIELL   GI F+K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE++ ++FPV+YD+K+LMK C 
Subjt:  GSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQ--KYAGVLYGLG-----VENG
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF   I   KY G LYGLG     V+NG
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQ--KYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 104.3e-12376.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTLK+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE

Query:  FNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMK
        FNIG DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ VYFP +YDIKHLM 
Subjt:  FNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GS +KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.0e-9663.26Show/hide
Query:  DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQF
        D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++NY TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQF

Query:  NFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIK
        NFREFN+ SD+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP + + FF+ +  +FPV+YDIK
Subjt:  NFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS+ KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.8e-12475.28Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D++Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP +YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.6e-12576.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIW
        MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   +++Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIW

Query:  QFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYD
        QFNFREF++ SDI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP  Q GFFE+I+VYFP +YD
Subjt:  QFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-12575.28Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D++Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP +YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-12575.28Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D++Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP +YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G + KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-12475.09Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D++Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI
        FNFREF++ SDIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP+ Q  FF+LINVYFP +YDI
Subjt:  FNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVEN
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G + KY+GVLYGLGVEN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-12676.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIW
        MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   +++Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIW

Query:  QFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYD
        QFNFREF++ SDI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP  Q GFFE+I+VYFP +YD
Subjt:  QFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-12476.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTLK+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE

Query:  FNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMK
        FNIG DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ VYFP +YDIKHLM 
Subjt:  FNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GS +KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACAT
AGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGT
TGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGT
GATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTC
TTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGG
CGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTA
TTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAA
ATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCGCTCTATCAAACCCTGTTTTCTCTCTGCCGCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTTGACCTCCTTCTACAACTCCCTTCTTC
TAGATCTGCCCTTCCCATCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCACTCCCTATTTCTTTTACATCACTTCATTTCTAGGGTTCCACTTAACCCCCTC
CTTCTCTTTCAGATCTGTAACCACTTCTTTACTTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCGCTTGCTTCTTTTTATATCCCCGTATCTGTTCGCCATATTTTC
TTTAACTCTTCGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGA
AGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCA
ATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGAT
AAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAA
CAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTG
GTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATG
AAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTG
TACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAAT
TACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACCGTTTTCAGCTTTCCTGCTCTGTAATAGAAACC
TCCGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGCTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACT
TATATGTTGTTACTAATTCCTTTAGGTTCGTTAATCATGTAAGGCCCTAAAGGTATTTGATATGATACACAATGTTGCCAATAGAACTTATTTCTTTAACAACCGGTTAT
GTGAATTCTCAG
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGS
DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN