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CSPI02G24320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G24320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr2:20841948..20844019
RNA-Seq ExpressionCSPI02G24320
SyntenyCSPI02G24320
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138679.1 uncharacterized protein LOC101205088 [Cucumis sativus]2.6e-70100Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

XP_008456569.1 PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo]3.0e-6696.24Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDED DSSD+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

XP_023550786.1 uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-5176.69Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M + PK + +KEDE +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+DAQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]2.1e-5176.69Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M + PK + +KEDE +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+DAQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]7.6e-6288.06Show/hide
Query:  MEDNPKFVAVKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYA
        M +NPKF+ +KEDE++PKS  PFPWFSFLPKFDFRLPFP+NGGKKPP VVVDE RKAD+DAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAV+WQVYA
Subjt:  MEDNPKFVAVKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYA

Query:  LGGFLILSWAWARWKERRPQRRSNDDDEDEDSSD
        LGGFLILSWAWARWKERRPQRRSNDD+EDEDSS+
Subjt:  LGGFLILSWAWARWKERRPQRRSNDDDEDEDSSD

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein1.3e-70100Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

A0A1S3C3J3 uncharacterized protein LOC1034964851.4e-6696.24Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDED DSSD+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

A0A5D3CKR2 Uncharacterized protein1.4e-6696.24Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        MEDNPKFVA+KEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKK PPVVVDE+RKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRPQRRSNDDDED DSSD+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

A0A6J1FFF8 uncharacterized protein LOC1114449955.0e-5175.94Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M +NPK + +KED  +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+ AQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

A0A6J1JVP7 uncharacterized protein LOC1114892981.7e-5175.94Show/hide
Query:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG
        M ++PK + +KE+E +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D DAQKPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALG
Subjt:  MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALG

Query:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS
        GFLILSWAWARWKERRP+RRS+DDDE+EDS D+
Subjt:  GFLILSWAWARWKERRPQRRSNDDDEDEDSSDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein4.8e-1443.52Show/hide
Query:  KPPPVVVDESRKADNDAQKP-----EFVRF----PKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQR---------RSNDD
        KPPP  +D +       ++P     E V F    PK+  P+   EAE   SG+TSN  ++WQVYALGGFL+L WAWARW ER  +             DD
Subjt:  KPPPVVVDESRKADNDAQKP-----EFVRF----PKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQR---------RSNDD

Query:  DEDEDSSD
        DED+ SSD
Subjt:  DEDEDSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAACCCAAAATTTGTTGCCGTAAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCC
GGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCG
TCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATGCCCTGGGCGGGTTTCTAATATTGAGTTGGGCATGGGCA
AGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGACGATGATGAGGACGAGGACTCCAGTGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
GGGATTTTGGTTTGAAAATGACGGTTTGTTTTGGAAGAAAAGAAATCGTTGTATTATCCGCCGCTTCATCAACAAAGACAATGACTACTACCCGTCTTTGTAGTTGATTG
ATCGCACTTTCCTTCTTCTTTTTCAGATTGCAACAAAAATGGAAGACAACCCAAAATTTGTTGCCGTAAAAGAAGACGAGAACAACCCAAAATCCCCCTTTCCCTGGTTC
TCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTTTTCCGGTCAACGGCGGCAAGAAACCGCCGCCTGTGGTGGTTGATGAATCTCGAAAGGCTGACAATGATGCTCAGAA
GCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGCCGATGTTTCCGGGAAGACTTCCAATCCGGCGGTTGTCTGGCAGGTATATG
CCCTGGGCGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCCCAAAGACGTTCAAATGACGATGATGAGGACGAGGACTCCAGTGATTCCTAG
TTATGTGTTTGCCTTTGAACAGCCCTCAATAAATGTTGAAGTTAAATTCTTAGTGCTAGAATCAATCTCGAGTCAATACTGTTTATTTGTAATTTCGAGTTAAATCAGTC
GTTTCCTAACCCTTTGTTGATCCTTGCAAATGATCTTAATGTGAAATTAAAATTGTCTCCATATGCAAAATCTTAACATGAAATTAAAACTGTCTCCATAAGTGTTCTCT
AATGCAAGAGCAAC
Protein sequenceShow/hide protein sequence
MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWA
RWKERRPQRRSNDDDEDEDSSDS