CuGenDBv2

Gene ID	CSPI02G24460
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DEAD-box ATP-dependent RNA helicase FANCM isoform X2
Genome location	Chr2:20994766..20996879
RNA-Seq Expression	CSPI02G24460
Synteny	CSPI02G24460
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domains	IPR039686 - FANCM/Mph1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8652234.1 hypothetical protein Csa_022145 [Cucumis sativus]

6.6e-210

90.93

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR

XP_011649875.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Cucumis sativus]

1.7e-210

90.34

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

XP_031736809.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucumis sativus]

1.7e-210

90.34

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

XP_031736810.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucumis sativus]

1.7e-210

90.34

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

XP_031736811.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucumis sativus]

1.7e-210

90.34

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQJ7 Helicase C-terminal domain-containing protein

8.4e-211

90.34

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLLNFSEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAVIKQTTSQTKILPDEFFPSPETDCVP                                      PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        SDSFIDDRVNASASSTQDGTSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

A0A1S3B2A7 Fanconi anemia group M protein isoform X4

3.5e-193

84.19

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAV ++TTSQTKILPDE FPSPETDCVP                                      PQFTPADE  ITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR
         DSFIDDRV+ASASSTQD TSKPDMMAIYR
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR

A0A1S3B3E0 Fanconi anemia group M protein isoform X1

9.3e-194

83.68

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAV ++TTSQTKILPDE FPSPETDCVP                                      PQFTPADE  ITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
         DSFIDDRV+ASASSTQD TSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

A0A1S3B3H7 Fanconi anemia group M protein isoform X2

9.3e-194

83.68

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAV ++TTSQTKILPDE FPSPETDCVP                                      PQFTPADE  ITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
         DSFIDDRV+ASASSTQD TSKPDMMAIYR  L+S
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

A0A1S4DUR1 Fanconi anemia group M protein isoform X3

3.5e-193

84.19

Show/hide

Query:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT
        MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPT
Subjt:  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPT

Query:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI
        EAV ++TTSQTKILPDE FPSPETDCVP                                      PQFTPADE  ITETQLSPRLTNLIESGFVPDSPI
Subjt:  EAVIKQTTSQTKILPDEFFPSPETDCVP--------------------------------------PQFTPADEFSITETQLSPRLTNLIESGFVPDSPI

Query:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
        DDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Subjt:  DDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE

Query:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS
        VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS
Subjt:  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSS

Query:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR
         DSFIDDRV+ASASSTQD TSKPDMMAIYR
Subjt:  SDSFIDDRVNASASSTQDGTSKPDMMAIYR

SwissProt top hits

e value

%identity

Alignment

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM

6.5e-19

32.46

Show/hide

Query:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV
        +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        SS         CN          L + + +       E +
Subjt:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV

Query:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRF
         +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD        S  K +   +       S +R  K  +   +   
Subjt:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRF

Query:  DDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS
        DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD    +A +TQ  + K DMMA+YR  L+S
Subjt:  DDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS

Arabidopsis top hits

e value

%identity

Alignment

AT1G35530.1 DEAD/DEAH box RNA helicase family protein

3.5e-20

32.35

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Query:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV
        +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        SS         CN          L + + +       E +
Subjt:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV

Query:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRF
         +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD        S  K +   +       S +R  K  +   +   
Subjt:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRF

Query:  DDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFL--LISYF
        DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD    +A +TQ  + K DMMA+YR++   IS+F
Subjt:  DDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFL--LISYF

AT1G35530.2 DEAD/DEAH box RNA helicase family protein

2.5e-18

31.62

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Query:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV
        +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        SS         CN          L + + +       E +
Subjt:  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESV

Query:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGD----MKKN-------ENIESMA--------KTSISPLGNMVG
         +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD    +K+N       ++I S +        K   +     + 
Subjt:  GIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGD----MKKN-------ENIESMA--------KTSISPLGNMVG

Query:  TFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFL--LISYF
        + +     KKKK       DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD    +A +TQ  + K DMMA+YR++   IS+F
Subjt:  TFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFL--LISYF

Sequences

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CDS sequence

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ATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACAGTCAATAAATGAAGTCAACGCATCAAAAGCAGA
ATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTACAATAGACCTCATTG
GTTCAGGTAGCAAATTATTGAATTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAGCAGACAACTTCACAA
ACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTGAGACTCAGCTTAGTCCTCG
TCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTGATGATTGTGGATATTCTAGACAACGGATATCTGAATCAGCAAAATCCCAGTTTATTTTGCCTG
CCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGATATTTTTCTCGCAAGCAGT
GAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTCCCTTGGCTACTATTGCAAG
CAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTTGGAGACATGAAGAAAAATG
AAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAAACGGGATGGTGAAAGGAGA
TTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGGTGTCTTCGGATGCTACCATATCTGGGGATGAAGATGACAACATTAAGAGCTCGTCTGATAGTTTCAT
AGATGATAGGGTCAATGCTAGTGCCTCGAGTACTCAAGATGGAACAAGCAAACCTGATATGATGGCAATTTACAGGTTTCTATTAATCTCATATTTCTCTGTTATTTAA

mRNA sequence

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Protein sequence

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MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQ
TKILPDEFFPSPETDCVPPQFTPADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASS
EGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERR
FDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLISYFSVI

CSPI02G24460 (gene) of Cucumber (PI 183967) v1 genome