; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G24490 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G24490
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDEAD-box ATP-dependent RNA helicase FANCM isoform X6
Genome locationChr2:21037112..21040015
RNA-Seq ExpressionCSPI02G24490
SyntenyCSPI02G24490
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR039686 - FANCM/Mph1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652234.1 hypothetical protein Csa_022145 [Cucumis sativus]3.8e-10699.49Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

XP_011649875.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Cucumis sativus]3.8e-10699.49Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

XP_031736809.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucumis sativus]3.8e-10699.49Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

XP_031736811.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucumis sativus]1.2e-10799Show/hide
Query:  QLLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAV
        +LLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAV
Subjt:  QLLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAV

Query:  RELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        RELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  RELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

XP_031736812.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Cucumis sativus]3.8e-10699.49Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

TrEMBL top hitse value%identityAlignment
A0A0A0LMN2 Helicase ATP-binding domain-containing protein2.4e-114100Show/hide
Query:  LLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVR
        LLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVR
Subjt:  LLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVR

Query:  ELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTVW
        ELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTVW
Subjt:  ELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTVW

Query:  YKSFDAH
        YKSFDAH
Subjt:  YKSFDAH

A0A1S3B2A7 Fanconi anemia group M protein isoform X45.3e-10698.46Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IP+PLRILALTATPGSKHQG+QQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

A0A1S4DTZ2 Fanconi anemia group M protein isoform X55.3e-10698.46Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IP+PLRILALTATPGSKHQG+QQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

A0A1S4DUR1 Fanconi anemia group M protein isoform X35.3e-10698.46Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IP+PLRILALTATPGSKHQG+QQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

A0A5A7T298 Fanconi anemia group M protein isoform X65.3e-10698.46Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        IP+PLRILALTATPGSKHQG+QQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRT+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

SwissProt top hitse value%identityAlignment
A0A1D5PRR9 Fanconi anemia group M protein2.5e-4442.19Show/hide
Query:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT
        +GK++F AP++ LV QQ+EAC  ++GIP     +MTG      R   W S+RVFF+TPQ++  D+  GTC    + CLV+DEAH+ALGN++YC  V+EL+
Subjt:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT

Query:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD
        +     R+LALTATPGS  + +QQ++ NL I+ ++   E   ++ PY H+R++E I V +GE+   I    + V+  F  +L  +G+L  RD
Subjt:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM1.5e-8172.82Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA  W+SKRVFFVTPQVLEKDIQSGTCL  YLVCLVIDEAHRALGNYSYCV VREL  
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        +P+ LRILALTATPGSK Q IQ IIDNL ISTL+YR+ESDHDV PYVHDRK+E+I+V +G+DA ++  +L  V+RP+  +L++ G+  NRD +T+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

Q7SDF3 ATP-dependent DNA helicase mph19.2e-3943.68Show/hide
Query:  KIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTKI
        K VF AP++PL  QQ++AC +I GIP+     +TG   P  R   W +KR+FF+TPQ L  D+  G    K +V LVIDEAHRA G+Y+Y   V  L + 
Subjt:  KIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTKI

Query:  PVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD
            RILALTATPGS  +G+Q +IDNL IS ++ R E   D+  YVH R I  I     ++ +E+ +   + ++P V KL S  I   RD
Subjt:  PVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD

Q8BGE5 Fanconi anemia group M protein homolog7.8e-4644.27Show/hide
Query:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT
        +GK+VF AP++PLV QQ+EAC +++GIPQ    +MTG      R   W S+RV F+TPQV+  D+  G     ++ CLV+DEAH+ALGNY+YC  VREL 
Subjt:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT

Query:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD
        K     RILAL+ATPGS  + +QQ+I NL I  ++ R E   D+ PY H+R++E + V +GE+   I    ++++  F + L    +L  RD
Subjt:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD

Q8IYD8 Fanconi anemia group M protein9.2e-4746.35Show/hide
Query:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT
        +GK+VF AP++PLV QQIEAC+ ++GIPQ    +MTG    + R   W SKRV F+TPQV+  D+  G C    + CLVIDEAH+ALGNY+YC  VREL 
Subjt:  AGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELT

Query:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD
        K     RILAL+ATPGS  + +QQ+I NL I  ++ R E   D+  Y H+RK+E + V +GE+   I    ++++  F   L    +L  RD
Subjt:  KIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRD

Arabidopsis top hitse value%identityAlignment
AT1G35530.1 DEAD/DEAH box RNA helicase family protein1.1e-8272.82Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA  W+SKRVFFVTPQVLEKDIQSGTCL  YLVCLVIDEAHRALGNYSYCV VREL  
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        +P+ LRILALTATPGSK Q IQ IIDNL ISTL+YR+ESDHDV PYVHDRK+E+I+V +G+DA ++  +L  V+RP+  +L++ G+  NRD +T+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV

AT1G35530.2 DEAD/DEAH box RNA helicase family protein1.1e-8272.82Show/hide
Query:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK
        GKIVF APSRPLV+QQIEACHNIVGIPQEWTID+TG   P+KRA  W+SKRVFFVTPQVLEKDIQSGTCL  YLVCLVIDEAHRALGNYSYCV VREL  
Subjt:  GKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGNYSYCVAVRELTK

Query:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV
        +P+ LRILALTATPGSK Q IQ IIDNL ISTL+YR+ESDHDV PYVHDRK+E+I+V +G+DA ++  +L  V+RP+  +L++ G+  NRD +T+
Subjt:  IPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCATCATCTCTTTGCCTCCTCGTGGTGTTCCTTCTCCAAGGATCTCAATTATTGCTTGCAGGCAAAATTGTATTTACTGCTCCTTCTCGACCACTGGTCTTGCA
ACAGATAGAAGCATGCCATAATATTGTTGGAATACCACAAGAATGGACCATTGACATGACAGGCATGATAAATCCGGCAAAAAGAGCATCTTTTTGGAGAAGTAAAAGAG
TTTTCTTTGTTACACCACAAGTACTAGAGAAGGATATTCAATCAGGCACATGTTTGATGAAATACCTGGTTTGCTTAGTGATTGATGAAGCCCATCGAGCACTTGGAAAT
TACTCTTATTGTGTTGCAGTTCGTGAGTTAACAAAAATACCTGTGCCACTAAGAATACTAGCCTTAACTGCCACACCAGGATCAAAGCATCAGGGTATTCAGCAAATCAT
TGACAACTTACACATTTCAACCCTTCAATATCGTGATGAAAGTGATCATGATGTCAGTCCATATGTTCATGACAGGAAAATAGAATTGATTCAAGTCGCAATGGGAGAAG
ATGCTGTTGAGATAGATAATAAGCTCCTGGAAGTTATGCGACCATTTGTGGCCAAACTTCGTTCAATAGGAATACTCCAGAACAGAGATTACAGAACGGTATGGTACAAA
TCTTTTGATGCACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCATCATCTCTTTGCCTCCTCGTGGTGTTCCTTCTCCAAGGATCTCAATTATTGCTTGCAGGCAAAATTGTATTTACTGCTCCTTCTCGACCACTGGTCTTGCA
ACAGATAGAAGCATGCCATAATATTGTTGGAATACCACAAGAATGGACCATTGACATGACAGGCATGATAAATCCGGCAAAAAGAGCATCTTTTTGGAGAAGTAAAAGAG
TTTTCTTTGTTACACCACAAGTACTAGAGAAGGATATTCAATCAGGCACATGTTTGATGAAATACCTGGTTTGCTTAGTGATTGATGAAGCCCATCGAGCACTTGGAAAT
TACTCTTATTGTGTTGCAGTTCGTGAGTTAACAAAAATACCTGTGCCACTAAGAATACTAGCCTTAACTGCCACACCAGGATCAAAGCATCAGGGTATTCAGCAAATCAT
TGACAACTTACACATTTCAACCCTTCAATATCGTGATGAAAGTGATCATGATGTCAGTCCATATGTTCATGACAGGAAAATAGAATTGATTCAAGTCGCAATGGGAGAAG
ATGCTGTTGAGATAGATAATAAGCTCCTGGAAGTTATGCGACCATTTGTGGCCAAACTTCGTTCAATAGGAATACTCCAGAACAGAGATTACAGAACGGTATGGTACAAA
TCTTTTGATGCACATTAG
Protein sequenceShow/hide protein sequence
MESSSLCLLVVFLLQGSQLLLAGKIVFTAPSRPLVLQQIEACHNIVGIPQEWTIDMTGMINPAKRASFWRSKRVFFVTPQVLEKDIQSGTCLMKYLVCLVIDEAHRALGN
YSYCVAVRELTKIPVPLRILALTATPGSKHQGIQQIIDNLHISTLQYRDESDHDVSPYVHDRKIELIQVAMGEDAVEIDNKLLEVMRPFVAKLRSIGILQNRDYRTVWYK
SFDAH