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CSPI02G24750 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G24750
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTIR domain-containing protein
Genome locationChr2:21232723..21233366
RNA-Seq ExpressionCSPI02G24750
SyntenyCSPI02G24750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023927832.1 TMV resistance protein N-like [Quercus suber]5.9e-0444.05Show/hide
Query:  FDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG
        FDG   L N RE   K   H L  L+K+LL+  L  + I F D Q G          K +LIVLDD+D ++QLE+L GER+ FG
Subjt:  FDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG

XP_024989846.1 TMV resistance protein N-like [Cynara cardunculus var. scolymus]2.0e-0439.77Show/hide
Query:  TSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKR-----------IFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG
        +S+FDG   ++N RE S K+ G  LP L++++L L L +K+           + K R C RK +LIVLDD+D+++QL++L G    FG
Subjt:  TSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKR-----------IFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG

XP_030961367.1 TMV resistance protein N-like isoform X1 [Quercus lobata]5.9e-0443.18Show/hide
Query:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG
        F ++F+G   L N RE   K   H L  L+K+LL   L  + I F D Q G          K +LIVLDD+D ++QLE L GERI FG
Subjt:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG

XP_030961368.1 TMV resistance protein N-like isoform X2 [Quercus lobata]5.9e-0443.18Show/hide
Query:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG
        F ++F+G   L N RE   K   H L  L+K+LL   L  + I F D Q G          K +LIVLDD+D ++QLE L GERI FG
Subjt:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG

XP_030961369.1 TMV resistance protein N-like isoform X3 [Quercus lobata]5.9e-0443.18Show/hide
Query:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG
        F ++F+G   L N RE   K   H L  L+K+LL   L  + I F D Q G          K +LIVLDD+D ++QLE L GERI FG
Subjt:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG

TrEMBL top hitse value%identityAlignment
A0A0A0LMF1 Uncharacterized protein1.5e-5380.71Show/hide
Query:  MSESTENQKTLQQDEFQRWRDDLTEIANSSGVVSTQTGQNHHHHRYYYFEKLKMFKIISAVFFTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKL
        MSESTENQ+TLQQDEFQRWRDDLTEIANSSGVVSTQTGQNHHHHRYYYFEK                       NERENS KNKGHKLPDL+KKLLYLKL
Subjt:  MSESTENQKTLQQDEFQRWRDDLTEIANSSGVVSTQTGQNHHHHRYYYFEKLKMFKIISAVFFTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKL

Query:  CRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG
        CRKRIFKDRQCGRKGLLIVL DIDYIEQLENLVGERIQFG
Subjt:  CRKRIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG

A0A2J6LC65 TIR domain-containing protein2.9e-0442.27Show/hide
Query:  IISAVF--FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRK-----------RIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG
        + S++F   +SKFDG   L+N R  S KN G  L +L++K+L   L +K           R+ KDR   RK +LIVLDD+D +E LE+L G R  FG
Subjt:  IISAVF--FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRK-----------RIFKDRQCGRKGLLIVLDDIDYIEQLENLVGERIQFG

A0A7N2LA80 TIR domain-containing protein2.9e-0443.18Show/hide
Query:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG
        F ++F+G   L N RE   K   H L  L+K+LL   L  + I F D Q G          K +LIVLDD+D ++QLE L GERI FG
Subjt:  FTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRI-FKDRQCGR---------KGLLIVLDDIDYIEQLENLVGERIQFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGAAAGCACAGAAAATCAAAAAACTCTCCAACAAGATGAATTCCAAAGATGGAGGGACGATCTCACAGAAATTGCTAATTCATCTGGTGTGGTTTCCACACAGAC
TGGTCAAAATCATCATCATCACCGTTATTATTACTTTGAGAAGTTAAAAATGTTTAAAATCATTAGTGCTGTTTTCTTTACAAGTAAATTTGATGGTTATCCCCTTCTTG
AGAACGAAAGAGAAAATTCTGATAAAAATAAAGGACATAAACTACCAGATTTACGAAAGAAGCTTCTATATCTCAAGTTATGCAGGAAGAGAATCTTCAAAGATAGGCAA
TGTGGAAGGAAGGGGTTGCTTATTGTTCTTGATGACATTGATTACATAGAACAATTAGAGAATTTAGTAGGAGAACGCATTCAGTTCGGAGCTAAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGAAAGCACAGAAAATCAAAAAACTCTCCAACAAGATGAATTCCAAAGATGGAGGGACGATCTCACAGAAATTGCTAATTCATCTGGTGTGGTTTCCACACAGAC
TGGTCAAAATCATCATCATCACCGTTATTATTACTTTGAGAAGTTAAAAATGTTTAAAATCATTAGTGCTGTTTTCTTTACAAGTAAATTTGATGGTTATCCCCTTCTTG
AGAACGAAAGAGAAAATTCTGATAAAAATAAAGGACATAAACTACCAGATTTACGAAAGAAGCTTCTATATCTCAAGTTATGCAGGAAGAGAATCTTCAAAGATAGGCAA
TGTGGAAGGAAGGGGTTGCTTATTGTTCTTGATGACATTGATTACATAGAACAATTAGAGAATTTAGTAGGAGAACGCATTCAGTTCGGAGCTAAGGACTAG
Protein sequenceShow/hide protein sequence
MSESTENQKTLQQDEFQRWRDDLTEIANSSGVVSTQTGQNHHHHRYYYFEKLKMFKIISAVFFTSKFDGYPLLENERENSDKNKGHKLPDLRKKLLYLKLCRKRIFKDRQ
CGRKGLLIVLDDIDYIEQLENLVGERIQFGAKD