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CSPI02G25130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G25130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGag protease polyprotein
Genome locationChr2:21472464..21472987
RNA-Seq ExpressionCSPI02G25130
SyntenyCSPI02G25130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035974.1 hypothetical protein E6C27_scaffold56G001830 [Cucumis melo var. makuwa]5.3e-0945.54Show/hide
Query:  DNTELVDLALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE-
        D  +LVD  LR+E S+G K   S  S +EEK S+   +KK K+  SQ   WSS+ K RC+ECGKRH               +  HYKSE+Q K K  EE 
Subjt:  DNTELVDLALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE-

Query:  PAQIGVVSHLVQ
          QIGV SH VQ
Subjt:  PAQIGVVSHLVQ

KAA0056429.1 hypothetical protein E6C27_scaffold186G001860 [Cucumis melo var. makuwa]3.2e-0641.76Show/hide
Query:  ALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE
        AL++E S+  KRP SE S +EE++++  + KKSK+  SQG RW  + K +C + G+RH              GE GHYKSE+Q K    EE
Subjt:  ALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE

KAA0068140.1 gag protease polyprotein [Cucumis melo var. makuwa]3.2e-0639.18Show/hide
Query:  TELVDLALRI-------ENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQV
        +++++ A+R+       E S   K+  S FS +EE+KSV GSSK++KS+F QG RW+ + K R TECGKRH              G+ GH++ EW +
Subjt:  TELVDLALRI-------ENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQV

KGN63119.1 hypothetical protein Csa_022008 [Cucumis sativus]9.3e-2298.21Show/hide
Query:  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV
        MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIE SVGGKRPISEFSEKEEKKSV
Subjt:  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV

TYK28974.1 putative polyprotein [Cucumis melo var. makuwa]6.7e-0443.53Show/hide
Query:  EEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLEGEHGHYKSEWQVKTKVGEEPAQIGVVSHLVQQPSRGGSTVDKKKK
        E K S  G SKK+KS FS+G  W  +   +C EC                   TKV EEP +IGV SHLV Q SR G  +DK KK
Subjt:  EEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLEGEHGHYKSEWQVKTKVGEEPAQIGVVSHLVQQPSRGGSTVDKKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LQ25 Uncharacterized protein4.5e-2298.21Show/hide
Query:  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV
        MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIE SVGGKRPISEFSEKEEKKSV
Subjt:  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV

A0A5D3DC62 Gag protease polyprotein1.5e-0639.18Show/hide
Query:  TELVDLALRI-------ENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQV
        +++++ A+R+       E S   K+  S FS +EE+KSV GSSK++KS+F QG RW+ + K R TECGKRH              G+ GH++ EW +
Subjt:  TELVDLALRI-------ENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQV

A0A5D3DZA3 Uncharacterized protein1.5e-0641.76Show/hide
Query:  ALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE
        AL++E S+  KRP SE S +EE++++  + KKSK+  SQG RW  + K +C + G+RH              GE GHYKSE+Q K    EE
Subjt:  ALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE

A0A5D3DZN6 Putative polyprotein3.2e-0443.53Show/hide
Query:  EEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLEGEHGHYKSEWQVKTKVGEEPAQIGVVSHLVQQPSRGGSTVDKKKK
        E K S  G SKK+KS FS+G  W  +   +C EC                   TKV EEP +IGV SHLV Q SR G  +DK KK
Subjt:  EEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLEGEHGHYKSEWQVKTKVGEEPAQIGVVSHLVQQPSRGGSTVDKKKK

A0A5D3E3Q3 Retrotrans_gag domain-containing protein2.5e-0945.54Show/hide
Query:  DNTELVDLALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE-
        D  +LVD  LR+E S+G K   S  S +EEK S+   +KK K+  SQ   WSS+ K RC+ECGKRH               +  HYKSE+Q K K  EE 
Subjt:  DNTELVDLALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLE------------GEHGHYKSEWQVKTKVGEE-

Query:  PAQIGVVSHLVQ
          QIGV SH VQ
Subjt:  PAQIGVVSHLVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGTGATGCAACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAATAG
TGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTTGGAGGTTCTAGTAAAAAGTCCAAGTCCGCATTCAGTCAAGGATTGCGTTGGA
GTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTTAGAGGGAGAACATGGGCATTACAAAAGTGAATGGCAAGTTAAAACTAAAGTAGGCGAGGAACCA
GCGCAAATAGGGGTGGTGTCACACTTAGTACAACAACCTTCGCGAGGAGGCTCTACAGTAGACAAAAAAAAAAAAATTGTGGATATAGAATTTCGGGGACGAAATGACGA
AATTCTTAAAGGATGGGAGAGTTGTGAGCGACTCATGTATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGTGATGCAACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAATAG
TGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTTGGAGGTTCTAGTAAAAAGTCCAAGTCCGCATTCAGTCAAGGATTGCGTTGGA
GTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTTAGAGGGAGAACATGGGCATTACAAAAGTGAATGGCAAGTTAAAACTAAAGTAGGCGAGGAACCA
GCGCAAATAGGGGTGGTGTCACACTTAGTACAACAACCTTCGCGAGGAGGCTCTACAGTAGACAAAAAAAAAAAAATTGTGGATATAGAATTTCGGGGACGAAATGACGA
AATTCTTAAAGGATGGGAGAGTTGTGAGCGACTCATGTATGAATAG
Protein sequenceShow/hide protein sequence
MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSVGGSSKKSKSAFSQGLRWSSNPKWRCTECGKRHLEGEHGHYKSEWQVKTKVGEEP
AQIGVVSHLVQQPSRGGSTVDKKKKIVDIEFRGRNDEILKGWESCERLMYE