; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G25270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G25270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein-like protein
Genome locationChr2:21547740..21548667
RNA-Seq ExpressionCSPI02G25270
SyntenyCSPI02G25270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138634.1 uncharacterized protein LOC101215025 [Cucumis sativus]4.8e-8299.39Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE FLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_008441261.1 PREDICTED: uncharacterized protein LOC103485443 [Cucumis melo]1.5e-7595.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE F+TS NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_022993370.1 uncharacterized protein LOC111489414 [Cucurbita maxima]4.5e-6482.32Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD QD+DD   D DD+ N+IPEKN+KEVRARRKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLED++SDRRIEEQE  LT+ NT+AAGI +PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_023546418.1 uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]1.0e-6382.32Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAV GSPTRSP ASP+IHLRRRRRKTLRMLLNRTDRRRFP+QD SAD QD+D    D DD+ N+IPEKN+KEVRARRKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLED++SDRRIEEQEG LT+ N +AAGI + STTRRSLRP+S TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

XP_038885993.1 uncharacterized protein LOC120076298 [Benincasa hispida]1.0e-6887.8Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASP+IHLRRRRRKTLRMLLNRTDRRRFP+QDNSADSQD+DD   D DD+  +IPEKNEKEVRARRKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLED++SDRRIEE+EGFLT+ NT+AAGI SPSTTRRSLRP+SATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0LQR3 Uncharacterized protein2.3e-8299.39Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE FLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A1S3B320 uncharacterized protein LOC1034854437.2e-7695.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE F+TS NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A5D3C5R9 Protein PCF11-like7.2e-7695.12Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLD  D D DDNHNLIPEKNEKEVRARRKLKDLFVSSP
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLEDRLSDRRIEEQE F+TS NTNAAGI SPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A6J1JSX9 uncharacterized protein LOC1114875514.8e-6482.93Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAV GSPTRSP ASP+IHLRRRRRKTLRMLLNRTDRRRFP+QD SAD QD+D    D DD+ N+IPEKN+KEVRARRKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLED +SDRRIEEQEG LT+ NT+AAGI + STTRRSLRP+S TFRYRFLRRAWRPVLVAIPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

A0A6J1JYC4 uncharacterized protein LOC1114894142.2e-6482.32Show/hide
Query:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        MATLHKFKLLASQCAVAG PT+SP ASP+ HLRRRRRKTLRMLLNRTDRRRFP+QDNSAD QD+DD   D DD+ N+IPEKN+KEVRARRKLKDLFVSS 
Subjt:  MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        PPLED++SDRRIEEQE  LT+ NT+AAGI +PS TRRSLRP+SATFRYRFLRRAWRPVLV IPE
Subjt:  PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown2.3e-1842.94Show/hide
Query:  TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP
        +L KFKLLA+ C+ VA SPTR    SP+IHL  RRRKTLR+LL R +DR R P   N+ D     D                  ++R+ RKL DLFVSSP
Subjt:  TLHKFKLLASQCA-VAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSP

Query:  PPLE-------DRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE
        P  E       D+ +   +E +     +  +N AG     T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Subjt:  PPLE-------DRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRR-----SLRPVSA-TFRYRFLRRAWRPVLVAIPE

AT1G68430.1 unknown protein6.1e-1138.46Show/hide
Query:  MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFV
        MATL +FK L +QC VA  SPTRSP+   SPL+ L RR++ TL+MLL+     R        + Q L  H H              K+V A RKLKDLFV
Subjt:  MATLHKFKLLASQCAVAG-SPTRSPN--ASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFV

Query:  SSPPPLEDRLSDRRI--EEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE
        SS    E++  D R   + +E  L +        S          PV   F  R L+RAWRP L  I E
Subjt:  SSPPPLEDRLSDRRI--EEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE

AT5G16200.1 50S ribosomal protein-related9.1e-1538.01Show/hide
Query:  MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDL
        ++ LHKFKL A+    + + AGSPT SP  SP+ +L  RRRKTLRML ++ +D RR   +    +S + D +  +         +K       RRKL++L
Subjt:  MATLHKFKLLAS----QCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNR-TDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDL

Query:  FVSSP-PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE
         V+SP PP + R     I E+   ++  N  + G     T RR     S  +FR R LR+ WRPVLV+IPE
Subjt:  FVSSP-PPLEDRLSDRRIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSA-TFRYRFLRRAWRPVLVAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATCCATCTCCGTCGTCGCCGCCG
TAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGACTCTCAAGATCTCGACGACCACGACCACGACCACGACGACA
ACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGCCGCTTGAGGATAGGCTCTCCGATAGA
AGAATCGAAGAACAGGAAGGATTCCTAACATCGACCAACACTAACGCCGCTGGAATCAGTTCTCCATCTACCACTCGCCGCTCTCTTAGACCTGTATCGGCGACATTCCG
GTACAGATTTCTCAGGCGAGCTTGGCGGCCAGTGCTCGTTGCCATCCCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
CGCTGCTGCTCTCCTCTTCTCTCTCTCCAACTCCAAAGAGTAAAGAAGAACCCTTCAAAGGATCCAAAATTCACATCACACACTTCTTCTCACTTCTCATCCCTAATTCA
TTATTCAGATTCTTCAGATCTCTCTCTCTCTCTCTCTCTCACACACACAGTTTCCTCAATTTCTTATTCCAATTTTCTGTTTCACACAACACAAATACACACCAACGAAT
CTCTCAAATCTCCATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCGAAGCCCCAACGCTAGTCCCCTCATCCATCTCC
GTCGTCGCCGCCGTAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTTCCAAGATAACTCCGCCGACTCTCAAGATCTCGACGACCACGACCAC
GACCACGACGACAACCACAATTTGATTCCGGAGAAAAACGAGAAGGAGGTTCGAGCCAGACGAAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGCCGCTTGAGGATAG
GCTCTCCGATAGAAGAATCGAAGAACAGGAAGGATTCCTAACATCGACCAACACTAACGCCGCTGGAATCAGTTCTCCATCTACCACTCGCCGCTCTCTTAGACCTGTAT
CGGCGACATTCCGGTACAGATTTCTCAGGCGAGCTTGGCGGCCAGTGCTCGTTGCCATCCCCGAGTAGAAGATTCTCCTCTCCGGTAAAATCTGTACGAAGAAATTCCAT
AATTTTTGCCTTAATAATTATCATTATTATTATTTTTTAAAATTTTCATAACATTTTTTCCCTAATAAATTCCGACGAGTCGTCTAGCGGTGGGGAGGAGAAAAAAAGTG
ACCAATGTAAATACAAAAATAATTACCAATGTTAATTATAATTAGTTT
Protein sequenceShow/hide protein sequence
MATLHKFKLLASQCAVAGSPTRSPNASPLIHLRRRRRKTLRMLLNRTDRRRFPFQDNSADSQDLDDHDHDHDDNHNLIPEKNEKEVRARRKLKDLFVSSPPPLEDRLSDR
RIEEQEGFLTSTNTNAAGISSPSTTRRSLRPVSATFRYRFLRRAWRPVLVAIPE