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CSPI02G25540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G25540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationChr2:21705974..21707118
RNA-Seq ExpressionCSPI02G25540
SyntenyCSPI02G25540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056546.1 hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa]4.4e-5376.43Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAIL                     KR+E+QEEE+TGSASVDVDMESENE+SIEDEED
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
        ESVYSNSFS+GLHAP+LKL II  KLKQK  RKQYEEYNSDDH CPIRHSF D V +
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ

KAE8652261.1 hypothetical protein Csa_022581 [Cucumis sativus]9.5e-6489.17Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI                 ASVDVDMESENEDSIEDEED
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
        ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ

KAG6578364.1 hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4770.32Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        M+ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAI                 AS+DVD ESENED ++D+E+
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTV
        E V  +  S+GLH PKLKL+II RKL+QK  R+QYE+YNSD +RCPIRH F D V
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTV

KAG6602686.1 Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4761.7Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGR---------------------------------
        MSADWGPVVVAVALFI+LSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTIL+IAIE                                    
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGR---------------------------------

Query:  --KRKEKQEEEITGSASVDVDMESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRD
          K +E +EEE+TGS+ VDVDM+SENED IEDEEDES+   SF++ LH P+LKL II R+L+QK  RKQ+E+ NSD H  PIRH  RD
Subjt:  --KRKEKQEEEITGSASVDVDMESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRD

RZB59728.1 hypothetical protein D0Y65_042794 [Glycine soja]1.3e-3658.97Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        M ADWGPV++AVALFILLSPGLLFQ PAR RVVEFGNM+TSGIAILVHAIIFFCILTILI                 TGSA VD+D   E+ED +E EED
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVN
        E V  N F++GLHA +LKL  + RK +++ R +Q+E+   D +RCPI H   D  N
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVN

TrEMBL top hitse value%identityAlignment
A0A0A0LT04 Uncharacterized protein5.7e-30100Show/hide
Query:  MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
        MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
Subjt:  MESENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ

A0A445GEX9 Uncharacterized protein6.3e-3758.97Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        M ADWGPV++AVALFILLSPGLLFQ PAR RVVEFGNM+TSGIAILVHAIIFFCILTILI                 TGSA VD+D   E+ED +E EED
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVN
        E V  N F++GLHA +LKL  + RK +++ R +Q+E+   D +RCPI H   D  N
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVN

A0A498HDU7 Uncharacterized protein1.4e-3352.23Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILI----IAIESGRK-------RKEKQEEEITGSASVDVDMES
        MSADWGPVVVAV +FILLSPGLLFQLPAR RV+EFGNM+TSGIAILVHA+I+FCI+TIL     I ++ G          ++ +   +TGSA +DVD++ 
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILI----IAIESGRK-------RKEKQEEEITGSASVDVDMES

Query:  ENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCP
        ++E+ IE+EE+ESV S+  ++GLHAPKL+L  ++R+ +++ R +Q ++++S  +  P
Subjt:  ENEDSIEDEEDESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCP

A0A5A7QQI9 Uncharacterized protein8.2e-3760.96Show/hide
Query:  DWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEEDESV
        DWGPVVVAVA+FILLSPGLLFQLPAR RV+EFGNM TSGI+ILVHAI++F  L    I ++       ++ E  TGSA VDVD++ E+E+S+E EEDE V
Subjt:  DWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEEDESV

Query:  YSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRH
          NS ++GLHA +L+LA++ R LKQ+ R +QYEEYNSD+HR P+ H
Subjt:  YSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRH

A0A5D3BWV4 Uncharacterized protein2.1e-5376.43Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED
        MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAIL                     KR+E+QEEE+TGSASVDVDMESENE+SIEDEED
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEED

Query:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ
        ESVYSNSFS+GLHAP+LKL II  KLKQK  RKQYEEYNSDDH CPIRHSF D V +
Subjt:  ESVYSNSFSIGLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)3.1e-2077.42Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        ADWGPV VAV LF++LSPGLLFQLPAR RV+E GNM TSGI+ILVHAI+FF I+TIL+IAI+
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT3G27027.1 Protein of unknown function (DUF 3339)2.1e-2485.94Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        MS DWGPV+VAV+LFILLSPGLLFQLPAR RVVEFGNM TSGIAILVHA I+FCILTIL+IAI+
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT3G48660.1 Protein of unknown function (DUF 3339)5.8e-1977.05Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI
        ADWGPVVVAV LF+LL+PGLLFQ+PAR RVVEFGNM TSG +ILVH IIFF ++TI  IAI
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI

AT5G40980.1 Protein of unknown function (DUF 3339)3.2e-2589.06Show/hide
Query:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE
        MSADWGPV+VAVALFILLSPGLLFQLPAR RV+EFGNM+TSGI+ILVHAII+FCILTILIIAI+
Subjt:  MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIE

AT5G63500.1 Protein of unknown function (DUF 3339)3.8e-1873.77Show/hide
Query:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI
        ADWGPV++AV LF++LSPGLLFQ+PA  RVVEFGNM TSG +ILVHAIIFF ++TI  IAI
Subjt:  ADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGACTGGGGTCCAGTTGTGGTGGCGGTGGCGTTGTTCATTCTCCTCTCCCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGCAA
TATGAACACCAGTGGAATTGCCATTTTGGTACATGCCATCATATTCTTCTGCATACTCACCATATTGATCATTGCAATTGAATCTGGAAGGAAAAGAAAAGAGAAACAAG
AAGAAGAGATTACCGGATCAGCCAGTGTAGATGTGGATATGGAGAGCGAGAATGAAGACAGCATAGAGGACGAAGAAGATGAGAGTGTGTATAGCAACAGCTTTTCCATT
GGTCTTCATGCTCCCAAACTCAAACTGGCGATTATTACCCGGAAACTGAAACAGAAGGCCAGGAGAAAGCAGTACGAAGAGTACAACTCCGATGACCACCGGTGCCCAAT
CCGACATAGTTTCAGAGATACCGTAAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGACTGGGGTCCAGTTGTGGTGGCGGTGGCGTTGTTCATTCTCCTCTCCCCGGGGCTGCTTTTTCAGTTGCCGGCGAGAATCAGGGTGGTGGAGTTTGGCAA
TATGAACACCAGTGGAATTGCCATTTTGGTACATGCCATCATATTCTTCTGCATACTCACCATATTGATCATTGCAATTGAATCTGGAAGGAAAAGAAAAGAGAAACAAG
AAGAAGAGATTACCGGATCAGCCAGTGTAGATGTGGATATGGAGAGCGAGAATGAAGACAGCATAGAGGACGAAGAAGATGAGAGTGTGTATAGCAACAGCTTTTCCATT
GGTCTTCATGCTCCCAAACTCAAACTGGCGATTATTACCCGGAAACTGAAACAGAAGGCCAGGAGAAAGCAGTACGAAGAGTACAACTCCGATGACCACCGGTGCCCAAT
CCGACATAGTTTCAGAGATACCGTAAATCAGTAA
Protein sequenceShow/hide protein sequence
MSADWGPVVVAVALFILLSPGLLFQLPARIRVVEFGNMNTSGIAILVHAIIFFCILTILIIAIESGRKRKEKQEEEITGSASVDVDMESENEDSIEDEEDESVYSNSFSI
GLHAPKLKLAIITRKLKQKARRKQYEEYNSDDHRCPIRHSFRDTVNQ