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CSPI02G25850 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G25850
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationChr2:21940193..21944026
RNA-Seq ExpressionCSPI02G25850
SyntenyCSPI02G25850
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649973.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]1.1e-4196.88Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDDK
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

XP_011649975.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]3.7e-4298.95Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDD
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD

XP_011649976.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]1.0e-39100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

XP_011649977.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]2.3e-44100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

XP_016901880.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo]2.6e-4094.79Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDDK
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein1.8e-4298.95Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDD
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD

A0A0A0LN06 Uncharacterized protein4.9e-40100Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A0A0LT36 Uncharacterized protein7.0e-3997.78Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
        MASIGARSAFRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPE

A0A1S4E0T5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like8.3e-4093.75Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFR AP MSFCLESMMPFHSVSSSALMTSMLSISR SCGWLPEAWNDDK
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

A0A1S4E1L9 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.3e-4094.79Show/hide
Query:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        MASIGARSAFRSFSGSARRAAAHIGSQPK SS+SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDDK
Subjt:  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.5e-0945.16Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS  + GWL +A NDD
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein6.1e-1139.36Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +  ++ +
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

AT1G28395.2 unknown protein6.1e-1139.36Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +  ++ +
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

AT1G28395.3 unknown protein6.1e-1139.36Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +  ++ +
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK

AT1G28395.4 unknown protein3.2e-1243.01Show/hide
Query:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD
        ARS FRS +  A   A    + PK   +S+ + FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR   GW+ +  NDD
Subjt:  ARSAFRSFSGSARRAAAHIGSQPK---ASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD

AT2G20585.1 nuclear fusion defective 61.0e-1045.16Show/hide
Query:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS  + GWL +A NDD
Subjt:  GARSAFRSFSGSARRAAAHIGSQPKASSSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGCTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGGCCTCATCATCCTCTCCCTTTCG
CATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGGAATGATGATAAATGA
mRNA sequenceShow/hide mRNA sequence
CAACTATCGTAGAAACCCCTCAGACCCAAAGTAGGGTTTTAGCTTTAACCCTCAGCAAGCCAGCCATGAAGCAAGAGTCAATTCCCTCTTGTTCATATTCCGAAACCAAG
AAGAACAACCTTCTGAATCTACCATTTCTTCTCATAATCAATGGCCTCAATTGGTGCTCGGTCTGCTTTCCGCTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACA
TCGGTTCTCAACCCAAGGCCTCATCATCCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAG
TCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGGAATGATGATAAATG
ACAAGTGGATTTTACGGATGATGACTTCTATTAAGTAAGCTTCCATGCTCCAAAAGGTGGTTTGTGAAGAAGAGCTTCCGATCAATGGCAATGGATTATTGTTATTTGAA
GACCGATTTGATTTTGATTTTTTAGTGTTGATTCTCTATTTCGTACTCATTGATAGTTAACATCTGTATGTGATCGTGTTGATTTTTTCATTGAGAAATTGACGACTTTG
TTTTCTTGCTGGAAAAGTGGGTTTGTATTTTGTAGTAGCTTCGATAAAAGTGACTTGAAATCTGTGCTTGTGATGTACGGTTGAATACGAGTGTCTTGAATCTTGGTTGA
TTCAAAATATTAAAGTGAAGATTTTCAACCAGAAAGCACAGATTTTTCTATCGCATAACACTAGCCATCTTTGTTTTTCAGTTGGGGACTCGAGTCCATTGTGAAACTTG
CCTTTACAATGTTGAGTTTTTGCTGTCTAACCGCCTCTTGTTTTGTTT
Protein sequenceShow/hide protein sequence
MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDDK