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CSPI02G25870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G25870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationChr2:21956580..21963006
RNA-Seq ExpressionCSPI02G25870
SyntenyCSPI02G25870
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652269.1 hypothetical protein Csa_021983 [Cucumis sativus]1.1e-3592.39Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
        MASIGARS FRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG+
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
KGN63196.1 hypothetical protein Csa_022217 [Cucumis sativus]1.5e-3794.57Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
        MASIGARS FRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG+
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
XP_011649972.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus]2.0e-3795.6Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
        MASIGARS FRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
XP_011649973.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]1.0e-3695.56Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPE
        MASIGARS FRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPE
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPE
XP_011649976.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3 [Cucumis sativus]1.4e-3593.41Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
        MASIGARS FRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
TrEMBL top hitse value%identityAlignment
A0A0A0LMP1 Uncharacterized protein3.5e-3593.33Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPE
        MASIGARS FRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPE
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPE
A0A0A0LN06 Uncharacterized protein5.3e-3692.39Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
        MASIGARS FRSFSGSARRAAAHIGSQPK S SSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG+
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
A0A0A0LT36 Uncharacterized protein7.4e-3894.57Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
        MASIGARS FRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG+
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS
A0A1S4E0Y3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X17.7e-3591.21Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
        MASIGARS FRSFSGSARRAAAHIGSQPKPS +SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
A0A5D3BHH0 Protein NUCLEAR FUSION DEFECTIVE 67.7e-3591.21Show/hide
Query:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
        MASIGARS FRSFSGSARRAAAHIGSQPKPS +SPFRMATNKPLSH TFRCAP MSFCLESMMPFHSVSSSALMTSMLSISR SC  LPEG
Subjt:  MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEG
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial6.1e-0544.3Show/hide
Query:  GARSTFRSFSGSARRAAAHIGSQPKPSPSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSIS
        GARS  R  + S+R AAA  G     + S+P  FR    +       R   E+SFC+ES++P+HS ++SALMTS LSIS
Subjt:  GARSTFRSFSGSARRAAAHIGSQPKPSPSSP--FRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSIS
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.2e-1147.5Show/hide
Query:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR
Subjt:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
AT1G28395.2 unknown protein1.2e-1147.5Show/hide
Query:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR
Subjt:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
AT1G28395.3 unknown protein1.2e-1147.5Show/hide
Query:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR
Subjt:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
AT1G28395.4 unknown protein1.2e-1147.5Show/hide
Query:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR
Subjt:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
AT1G28395.5 unknown protein1.2e-1147.5Show/hide
Query:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR
        ARS FRS +  A   A    + PKP PSS    FRM    PL++R FR   E+S C+E+M+P+H+ ++SAL+ SMLS+SR
Subjt:  ARSTFRSFSGSARRAAAHIGSQPKPSPSS---PFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGTGCTCGGTCTACTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCATCCTCTCCCTTTCG
TATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCAGCTTTGA
TGACTTCAATGCTCTCTATCTCACGCCCCAGCTGTGCTTTGCTCCCCGAAGGTAGCTAG
mRNA sequenceShow/hide mRNA sequence
CCCCCTTAGACCCAAAGCAGGGTTTTAGCTTTAGCCCTCACTCAGCAGCCAGCCAAGAAGCAAGAGTTAGTTCTCTCTTGTTCATATTCCGAAGCCAAGACGAACAACCT
TCAGAATCTATCATTTCTTCTCATAATCAATGGCCTCAATTGGTGCTCGGTCTACTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAA
CCCAAGCCCTCACCATCCTCTCCCTTTCGTATGGCAACTAACAAACCCCTCTCTCATCGTACTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCC
ATTTCACTCTGTGTCGTCCTCAGCTTTGATGACTTCAATGCTCTCTATCTCACGCCCCAGCTGTGCTTTGCTCCCCGAAGGTAGCTAGCACACTTTATAGGCCCATTGAT
GCTTCTTGCCTTCTTGTTGCTCTGCATGCAATGATGATAAGTGACAAGAAGAACTATACTGATGGTGACGTCTATTAAGTAGAAGCTTCCATGCTCCAAATGGTGGTTTG
TGAAGAAGAGCTTCCGATGAATGGCTATGGATTATTGTTATTTGAAGACTGATTTAATTTTAATTTTTAGTGTTGATTCTCTATTTCGGACCCTTTTATTGTTAACAATT
GTATGTGATCATGTTAATTTTTTCGTTGAATATTTCATTGAGCAATTGACAACTTCGTCTTCTTACTGGAAAAATGGGTTTGTATTTTGTATCAGCTTCGATATCAGTGA
CTTGAAATATGTGCTAGTGATACGTGGTTGAATACTAGTGCCTTTAAACTTAGTTAAAATATCAAAGTGAAGATTTTCAAACCAG
Protein sequenceShow/hide protein sequence
MASIGARSTFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRPSCALLPEGS