; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G26300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G26300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr2:22337161..22339619
RNA-Seq ExpressionCSPI02G26300
SyntenyCSPI02G26300
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039770.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-15050.62Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI E++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LP T++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P KWR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL   +I K F      +  +K                   
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+S + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK ++WF   +  K+ NG S SFWHS+W     LS  YPRLYALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

KAA0041367.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.6e-14950.27Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI  ++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LPST++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P +WR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLR------------QSKIKFFLGQYHREDPEK--------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL             + KI   L  +      K        
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLR------------QSKIKFFLGQYHREDPEK--------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+  + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK V+WF   +  K+ NG S SFWHS+W     LS  YPRL+ALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.9e-14649.73Show/hide
Query:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS
        + HF +IY+   +  ++I+NL W PI     S    PF   EIK ++ SF + KAPG DG+T+ F+KK W   K ++L VF+D  K G+VN N+N T+ +
Subjt:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS

Query:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL
        LI+KKEKC   +D+RPISLTTSLYKI++  LANRLK  LP TI+  QM F+ GRQI DAIL+ N+ ID WK +K  G + KLDI+KAFDKI+W+FID++L
Subjt:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL

Query:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINN-FNLTHLLFADDILLFVEDNDD
         KK FP KWR+WI ACI +VQYSIL+NG P+G+I   RGIRQGDPLSP IFVLAMDYLSR+L HLE +  IKG + NN  N++HLLFADD+L+FVEDN+ 
Subjt:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINN-FNLTHLLFADDILLFVEDNDD

Query:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------
        Y+ NLQ A+ LFEKA+GL  N +KSTISP+N+S  R+D+IA+ +G +T FLP+ YLG+PL    + + F  Q     H++                    
Subjt:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------

Query:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD
              T QL           EI  H +         K+N + +NW+  T+  + GGLGI+ L DTN A L KWLWRY N+ N+LWK  ID KY      
Subjt:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD

Query:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS
            V + SS+N PW +I K  DW+ SKI    N+GSSLSFWHS W     LS   PRLYALS
Subjt:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-14649.73Show/hide
Query:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS
        + HF +IY+   +  ++I+NL W PI     S    PF   EIK ++ SF + KAPG DG+T+ F+KK W   K ++L VF+D  K G+VN N+N T+ +
Subjt:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS

Query:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL
        LI+KKEKC   +D+RPISLTTSLYKI++  LANRLK  LP TI+  QM F+ GRQI DAIL+ N+ ID WK +K  G + KLDI+KAFDKI+W+FID++L
Subjt:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL

Query:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNF-NLTHLLFADDILLFVEDNDD
         KK FP KWR+WI ACI +VQYSIL+NG P+G+I   RGIRQGDPLSP IFVLAMDYLSR+L HLE +  IKG + NN+ N++HLLFADD+L+FVEDN+ 
Subjt:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNF-NLTHLLFADDILLFVEDNDD

Query:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------
        Y+ NLQ A+ LFEKA+GL  N +KSTISP+N+S  R+D+IA+ +G +T FLP+ YLG+PL    + + F  Q     H++                    
Subjt:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------

Query:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD
              T QL           EI  H +         K+N + +NW+  T+  + GGLGI+ L DTN A L KWLWRY N+ N+LWK  ID KY      
Subjt:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD

Query:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS
            V + SS+N PW +I K  DW+ SKI    N+GSSLSFWHS W     LS   PRLYALS
Subjt:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS

XP_016902461.1 PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo]2.1e-15050.62Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI E++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LP T++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P KWR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL   +I K F      +  +K                   
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+S + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK ++WF   +  K+ NG S SFWHS+W     LS  YPRLYALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

TrEMBL top hitse value%identityAlignment
A0A1S4E2K5 LINE-1 retrotransposable element ORF2 protein1.0e-15050.62Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI E++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LP T++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P KWR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL   +I K F      +  +K                   
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+S + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK ++WF   +  K+ NG S SFWHS+W     LS  YPRLYALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

A0A5A7TI93 LINE-1 retrotransposable element ORF2 protein4.2e-14950.27Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI  ++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LPST++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P +WR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLR------------QSKIKFFLGQYHREDPEK--------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL             + KI   L  +      K        
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLR------------QSKIKFFLGQYHREDPEK--------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+  + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK V+WF   +  K+ NG S SFWHS+W     LS  YPRL+ALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein3.3e-14649.73Show/hide
Query:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS
        + HF +IY+   +  ++I+NL W PI     S    PF   EIK ++ SF + KAPG DG+T+ F+KK W   K ++L VF+D  K G+VN N+N T+ +
Subjt:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS

Query:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL
        LI+KKEKC   +D+RPISLTTSLYKI++  LANRLK  LP TI+  QM F+ GRQI DAIL+ N+ ID WK +K  G + KLDI+KAFDKI+W+FID++L
Subjt:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL

Query:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINN-FNLTHLLFADDILLFVEDNDD
         KK FP KWR+WI ACI +VQYSIL+NG P+G+I   RGIRQGDPLSP IFVLAMDYLSR+L HLE +  IKG + NN  N++HLLFADD+L+FVEDN+ 
Subjt:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINN-FNLTHLLFADDILLFVEDNDD

Query:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------
        Y+ NLQ A+ LFEKA+GL  N +KSTISP+N+S  R+D+IA+ +G +T FLP+ YLG+PL    + + F  Q     H++                    
Subjt:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------

Query:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD
              T QL           EI  H +         K+N + +NW+  T+  + GGLGI+ L DTN A L KWLWRY N+ N+LWK  ID KY      
Subjt:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD

Query:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS
            V + SS+N PW +I K  DW+ SKI    N+GSSLSFWHS W     LS   PRLYALS
Subjt:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein8.7e-14749.73Show/hide
Query:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS
        + HF +IY+   +  ++I+NL W PI     S    PF   EIK ++ SF + KAPG DG+T+ F+KK W   K ++L VF+D  K G+VN N+N T+ +
Subjt:  MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS

Query:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL
        LI+KKEKC   +D+RPISLTTSLYKI++  LANRLK  LP TI+  QM F+ GRQI DAIL+ N+ ID WK +K  G + KLDI+KAFDKI+W+FID++L
Subjt:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL

Query:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNF-NLTHLLFADDILLFVEDNDD
         KK FP KWR+WI ACI +VQYSIL+NG P+G+I   RGIRQGDPLSP IFVLAMDYLSR+L HLE +  IKG + NN+ N++HLLFADD+L+FVEDN+ 
Subjt:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNF-NLTHLLFADDILLFVEDNDD

Query:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------
        Y+ NLQ A+ LFEKA+GL  N +KSTISP+N+S  R+D+IA+ +G +T FLP+ YLG+PL    + + F  Q     H++                    
Subjt:  YIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL-RQSKIKFFLGQ----YHRE--------------------

Query:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD
              T QL           EI  H +         K+N + +NW+  T+  + GGLGI+ L DTN A L KWLWRY N+ N+LWK  ID KY      
Subjt:  --DPEKTEQL-----------EIFLHLKG-------RKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMD

Query:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS
            V + SS+N PW +I K  DW+ SKI    N+GSSLSFWHS W     LS   PRLYALS
Subjt:  LFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALS

A0A5D3DM72 LINE-1 retrotransposable element ORF2 protein7.6e-15150.62Show/hide
Query:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT
        ++HF  IY      +P +I+NL W PI  +Q       FT +EI E++ +F +NK+PG DGFT++F+K  W+  K  IL +F+D   N ++N+ +N T  
Subjt:  MEHFSSIY-SSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYT

Query:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI
        +LIAKKEKC    D+RPISLTTS+YK+++ V+A RLK  LP T++  QM FV GRQI DAILV N+ IDYW++KK  G + KLDI+KAFDK+NW FIDF+
Subjt:  SLIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFI

Query:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND
        L KK +P KWR WI ACI SVQYSI+ING+PRGKI P+RGIRQGDP+SP IFVLAMDY+SR+L  + +  +IKG  +  N NLTHLLFADDILLFVED++
Subjt:  LKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTI-NNFNLTHLLFADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------
          I+NL+  I+LF+ A+GL+IN NKSTISP+NV   R+++IA+ WGI T FLPI YLG+PL   +I K F      +  +K                   
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKI-KFFLGQYHREDPEK-------------------

Query:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM
               T QL IF       KNI          NP        VNW+KIT+S + GGLGI+ L DTNFA LTKWLWRY+++ + LWK +I+ KY S   
Subjt:  -------TEQLEIFLHLKGRKKNI----------NP--------VNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDM

Query:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST
             V  +SSS  PW SICK ++WF   +  K+ NG S SFWHS+W     LS  YPRLYALST
Subjt:  DLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALST

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.9e-3029.31Show/hide
Query:  IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEK-CRMATDFRPISLTTSLY
        +   ++ +   P T  EI   + S  + K+PG DGFT +F+++        +L++FQ I K G++  +  E    LI K  +      +FRPISL     
Subjt:  IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEK-CRMATDFRPISLTTSLY

Query:  KILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILSVQYS
        KIL+ +LANR++  +   I   Q+ F+ G Q    I  +   I +  + K  + +I  +D +KAFDKI   F+   L K      + + I A       +
Subjt:  KILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILSVQYS

Query:  ILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNINFNK
        I++NG+         G RQG PLSPL+F + ++ L+R ++   Q+K+IKG  +    +   LFADD+++++E+     +NL   I  F K +G  IN  K
Subjt:  ILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNINFNK

Query:  STISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQY
        S     N +++   +I            I YLG+ L +     F   Y
Subjt:  STISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQY

P08548 LINE-1 reverse transcriptase homolog6.7e-2727.11Show/hide
Query:  EHFSSIYSSSMFTPLVIENLL---WIP-IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNET
        E++  +YS        I+  L    +P +   ++     P +  EI  ++ +    K+PG DGFT +F++         +L +FQ+I K G++     E 
Subjt:  EHFSSIYSSSMFTPLVIENLL---WIP-IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNET

Query:  YTSLIAKKEK-CRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNF
          +LI K  K      ++RPISL     KIL+ +L NR++  +   I   Q+ F+ G Q    I  +   I +  K+K    +I  +D +KAFD I   F
Subjt:  YTSLIAKKEK-CRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNF

Query:  IDFILKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVE
        +   LKK      + + I A       +I++NG          G RQG PLSPL+F + M+ L+  ++   ++K IKG  I +  +   LFADD+++++E
Subjt:  IDFILKKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVE

Query:  DNDDYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQYHRED
        +  D    L   I  +   +G  IN +KS ++ +  +  +++K         D +P T +   ++      +LG Y  +D
Subjt:  DNDDYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQYHRED

P11369 LINE-1 retrotransposable element ORF2 protein2.2e-3030.7Show/hide
Query:  IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFK----NGVVNQNMNETYTSLIAKKEK-CRMATDFRPISLT
        +   Q+     P +  EI+  + S  + K+PG DGF+ +F++    TFK +++ +   +F      G +  +  E   +LI K +K      +FRPISL 
Subjt:  IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFK----NGVVNQNMNETYTSLIAKKEK-CRMATDFRPISLT

Query:  TSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILS
            KIL+ +LANR++  + + I   Q+ F+ G Q    I  +   I Y  K+K  + +I  LD +KAFDKI   F+  +L++      +   I A    
Subjt:  TSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYW-KIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILS

Query:  VQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNI
           +I +NG+    I    G RQG PLSP +F + ++ L+R ++   QQK+IKG  I    +   L ADD+++++ D  +  R L   I+ F +  G  I
Subjt:  VQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNI

Query:  NFNKST--ISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL
        N NKS   +   N   E+  +  T + I T+   I YLG+ L
Subjt:  NFNKST--ISPVNVSKERSDKIATSWGIKTDFLPITYLGMPL

P14381 Transposon TX1 uncharacterized 149 kDa protein3.5e-2826.27Show/hide
Query:  FSSIYSSSMFTPLVIENLLW--IP-IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS
        + +++S    +P   E  LW  +P + + +      P T+DE+ +++     NK+PGLDG TI+FF+  W+T   +   V  + FK G +  +      S
Subjt:  FSSIYSSSMFTPLVIENLLW--IP-IEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTS

Query:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL
        L+ KK   R+  ++RP+SL ++ YKI++  ++ RLK +L   I   Q   V GR I D + +    + + +          LD +KAFD+++  ++   L
Subjt:  LIAKKEKCRMATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFIL

Query:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLL--FADDILLFVEDND
        +   F  ++  ++     S +  + IN      +   RG+RQG PLS  ++ LA++    +L     +K++ G  +   ++  +L  +ADD++L  +D  
Subjt:  KKKQFPDKWREWIHACILSVQYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLL--FADDILLFVEDND

Query:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQY
        D +   Q    ++  A+   IN++KS+                   +K DFLP  +  +   +SKI  +LG Y
Subjt:  DYIRNLQFAIHLFEKATGLNINFNKSTISPVNVSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQY

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.0e-1526.33Show/hide
Query:  PFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKI---WNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEKCRMATDFRPISLTTSLYKILSTVLAN
        P   +EI+ ++  +  + APG DG T+    +     N  +L++L         G V        T+LI K       +++RPI++ ++L ++L  +LA 
Subjt:  PFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKI---WNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEKCRMATDFRPISLTTSLYKILSTVLAN

Query:  RLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILSVQYSILIN-GKPRG
        RL+  +    + +    ++G  + +++L+        + +KT+ ++  LD++KAFD ++ + I   L++    +    +I   +     +I +  G    
Subjt:  RLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILSVQYSILIN-GKPRG

Query:  KIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNINFNKSTISPVNVS
        KI   RG++QGDPLSP +F   +D    +L  L+    I G TI    +  L FADD+LL +EDND  +      +  F +  G+++N  KS    V  S
Subjt:  KIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNINFNKSTISPVNVS

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.4e-0835.63Show/hide
Query:  EIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEKCRMATDFRPISLTTSLYKILS
        EI  +VF+   NKAPG D FT +FF + W   K + +   ++ F+ G + +  N T  +LI K       + FRP+S  T +YKI++
Subjt:  EIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEKCRMATDFRPISLTTSLYKILS

AT4G20520.1 RNA binding;RNA-directed DNA polymerases3.9e-0632.1Show/hide
Query:  LANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKK--THGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKW
        +  RLK L+ + I   Q +F+ GR  TD I+   + +   + KK     ++ KLD++KA+D+I W++++  L    FP+ W
Subjt:  LANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKK--THGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.2e-0426.36Show/hide
Query:  KKNINPVNWSKITNSL-DSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMDLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNG
        K+ I+ V W K+  S  D GGLG   L   N A L K  +R ++ P+ L   L+  +Y      +  +V   +  +  W SI    +  +  + R + +G
Subjt:  KKNINPVNWSKITNSL-DSGGLGITPLSDTNFAFLTKWLWRYLNDPNALWKSLIDEKYCSRDMDLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNG

Query:  SSLSFWHSNW
             W   W
Subjt:  SSLSFWHSNW

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)8.1e-1244.78Show/hide
Query:  LINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFN--LTHLLFADD
        +ING P+G + P+RG+RQGDPLSP +F+L  + LS + +  ++Q ++ G  ++N +  + HLLFADD
Subjt:  LINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFN--LTHLLFADD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACATTTCAGCTCCATTTATTCTTCAAGCATGTTCACTCCTCTGGTCATTGAAAATCTCCTATGGATTCCTATAGAAGATTCACAAATCTCAACACCTACTGTTCC
ATTCACTATGGATGAAATAAAGGAATCCGTGTTCTCCTTTGATAGCAACAAAGCTCCAGGACTTGATGGCTTCACTATCGACTTCTTCAAAAAAATTTGGAACACTTTCA
AGCTGAATATATTGGAAGTGTTCCAGGATATTTTCAAAAATGGTGTGGTCAACCAAAATATGAATGAAACGTATACTTCACTCATTGCCAAGAAAGAAAAATGTAGAATG
GCAACAGATTTCAGACCAATCAGTCTTACCACTTCTTTATATAAGATCCTTTCAACGGTTCTTGCAAATAGACTGAAACTGCTTCTTCCAAGCACAATCTCCAGTCAACA
AATGACATTTGTAAATGGTAGACAAATCACTGATGCAATCTTAGTTACAAATAAAACGATAGACTATTGGAAGATAAAGAAGACACATGGTTTAATCTTCAAACTGGATA
TCAAAAAAGCTTTTGATAAGATTAACTGGAACTTCATTGACTTCATCTTGAAGAAGAAGCAATTCCCTGACAAATGGAGGGAATGGATACATGCTTGTATTTTGTCTGTT
CAGTACTCCATTCTGATCAATGGCAAACCCAGAGGCAAAATCATTCCTAACAGAGGAATCAGACAAGGAGATCCTTTATCCCCTCTCATTTTTGTGCTAGCCATGGACTA
TCTTAGTAGAATTCTGCAACATCTTGAACAACAGAAGCAAATAAAAGGTACCACAATAAACAATTTCAATCTAACTCACCTTCTCTTTGCAGATGATATCTTGCTCTTTG
TTGAAGATAATGATGATTACATTAGGAATCTTCAATTTGCTATCCACCTTTTTGAAAAGGCCACGGGCTTAAATATTAACTTTAACAAGTCTACCATCTCTCCGGTTAAT
GTTTCAAAAGAAAGATCAGATAAGATTGCGACCAGTTGGGGGATAAAAACAGATTTCCTCCCAATAACATACTTAGGGATGCCCCTTAGGCAATCCAAGATCAAATTTTT
TTTGGGACAATATCATAGAGAAGATCCAGAGAAAACTGAACAATTAGAAATATTCCTTCATCTCAAAGGGAGAAAAAAAAACATCAACCCTGTTAATTGGTCAAAAATAA
CAAACTCTCTTGACTCTGGAGGATTGGGCATTACTCCTCTTTCTGATACAAACTTTGCTTTTCTCACAAAATGGCTATGGAGATATTTAAATGATCCAAATGCTCTATGG
AAATCTCTGATTGATGAAAAATATTGTAGTAGGGATATGGATTTGTTTCGTACAGTTGCAAAATACAGTAGCTCCAATGTCCCATGGACATCCATTTGCAAATCTGTTGA
TTGGTTCAACTCAAAGATAAAGAGGAAAGTTAATAATGGCAGCTCTTTATCTTTCTGGCATAGCAATTGGAGCACAGAGGGTATTTTAAGCAGAACATACCCAAGGTTAT
ATGCTTTATCCACAAAGCATATAATTGAGAAGTCTTCACACATTCAACTTGAACCTCCTTCCTTGAAATGCAATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACATTTCAGCTCCATTTATTCTTCAAGCATGTTCACTCCTCTGGTCATTGAAAATCTCCTATGGATTCCTATAGAAGATTCACAAATCTCAACACCTACTGTTCC
ATTCACTATGGATGAAATAAAGGAATCCGTGTTCTCCTTTGATAGCAACAAAGCTCCAGGACTTGATGGCTTCACTATCGACTTCTTCAAAAAAATTTGGAACACTTTCA
AGCTGAATATATTGGAAGTGTTCCAGGATATTTTCAAAAATGGTGTGGTCAACCAAAATATGAATGAAACGTATACTTCACTCATTGCCAAGAAAGAAAAATGTAGAATG
GCAACAGATTTCAGACCAATCAGTCTTACCACTTCTTTATATAAGATCCTTTCAACGGTTCTTGCAAATAGACTGAAACTGCTTCTTCCAAGCACAATCTCCAGTCAACA
AATGACATTTGTAAATGGTAGACAAATCACTGATGCAATCTTAGTTACAAATAAAACGATAGACTATTGGAAGATAAAGAAGACACATGGTTTAATCTTCAAACTGGATA
TCAAAAAAGCTTTTGATAAGATTAACTGGAACTTCATTGACTTCATCTTGAAGAAGAAGCAATTCCCTGACAAATGGAGGGAATGGATACATGCTTGTATTTTGTCTGTT
CAGTACTCCATTCTGATCAATGGCAAACCCAGAGGCAAAATCATTCCTAACAGAGGAATCAGACAAGGAGATCCTTTATCCCCTCTCATTTTTGTGCTAGCCATGGACTA
TCTTAGTAGAATTCTGCAACATCTTGAACAACAGAAGCAAATAAAAGGTACCACAATAAACAATTTCAATCTAACTCACCTTCTCTTTGCAGATGATATCTTGCTCTTTG
TTGAAGATAATGATGATTACATTAGGAATCTTCAATTTGCTATCCACCTTTTTGAAAAGGCCACGGGCTTAAATATTAACTTTAACAAGTCTACCATCTCTCCGGTTAAT
GTTTCAAAAGAAAGATCAGATAAGATTGCGACCAGTTGGGGGATAAAAACAGATTTCCTCCCAATAACATACTTAGGGATGCCCCTTAGGCAATCCAAGATCAAATTTTT
TTTGGGACAATATCATAGAGAAGATCCAGAGAAAACTGAACAATTAGAAATATTCCTTCATCTCAAAGGGAGAAAAAAAAACATCAACCCTGTTAATTGGTCAAAAATAA
CAAACTCTCTTGACTCTGGAGGATTGGGCATTACTCCTCTTTCTGATACAAACTTTGCTTTTCTCACAAAATGGCTATGGAGATATTTAAATGATCCAAATGCTCTATGG
AAATCTCTGATTGATGAAAAATATTGTAGTAGGGATATGGATTTGTTTCGTACAGTTGCAAAATACAGTAGCTCCAATGTCCCATGGACATCCATTTGCAAATCTGTTGA
TTGGTTCAACTCAAAGATAAAGAGGAAAGTTAATAATGGCAGCTCTTTATCTTTCTGGCATAGCAATTGGAGCACAGAGGGTATTTTAAGCAGAACATACCCAAGGTTAT
ATGCTTTATCCACAAAGCATATAATTGAGAAGTCTTCACACATTCAACTTGAACCTCCTTCCTTGAAATGCAATCTCTGA
Protein sequenceShow/hide protein sequence
MEHFSSIYSSSMFTPLVIENLLWIPIEDSQISTPTVPFTMDEIKESVFSFDSNKAPGLDGFTIDFFKKIWNTFKLNILEVFQDIFKNGVVNQNMNETYTSLIAKKEKCRM
ATDFRPISLTTSLYKILSTVLANRLKLLLPSTISSQQMTFVNGRQITDAILVTNKTIDYWKIKKTHGLIFKLDIKKAFDKINWNFIDFILKKKQFPDKWREWIHACILSV
QYSILINGKPRGKIIPNRGIRQGDPLSPLIFVLAMDYLSRILQHLEQQKQIKGTTINNFNLTHLLFADDILLFVEDNDDYIRNLQFAIHLFEKATGLNINFNKSTISPVN
VSKERSDKIATSWGIKTDFLPITYLGMPLRQSKIKFFLGQYHREDPEKTEQLEIFLHLKGRKKNINPVNWSKITNSLDSGGLGITPLSDTNFAFLTKWLWRYLNDPNALW
KSLIDEKYCSRDMDLFRTVAKYSSSNVPWTSICKSVDWFNSKIKRKVNNGSSLSFWHSNWSTEGILSRTYPRLYALSTKHIIEKSSHIQLEPPSLKCNL