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CSPI02G26950 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G26950
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrotransposable element Tf2
Genome locationChr2:22958979..22959458
RNA-Seq ExpressionCSPI02G26950
SyntenyCSPI02G26950
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032918.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.7e-2371.74Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP  RQ PPN+RQP  NN N +   PP++VASSSGTT  R++ P+QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
KAA0040832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.2e-2677.17Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQPL N+ N NPQ PP++VA+SSGTT  R+KSP QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
KAA0050443.1 polyprotein [Cucumis melo var. makuwa]2.9e-2068.48Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQ   +N N +PQ PP+T+ SSS TT  + K  TQSS PS MS ENYAMDLQFEQVSR  QGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
TYK17808.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.2e-2677.17Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQPL N+ N NPQ PP++VA+SSGTT  R+KSP QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
TYK28082.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.7e-2371.74Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP  RQ PPN+RQP  NN N +   PP++VASSSGTT  R++ P+QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
TrEMBL top hitse value%identityAlignment
A0A5A7SQU5 Retrotransposable element Tf21.8e-2371.74Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP  RQ PPN+RQP  NN N +   PP++VASSSGTT  R++ P+QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
A0A5A7TBK1 Retrotransposable element Tf26.0e-2777.17Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQPL N+ N NPQ PP++VA+SSGTT  R+KSP QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
A0A5A7U3G5 Polyprotein1.4e-2068.48Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQ   +N N +PQ PP+T+ SSS TT  + K  TQSS PS MS ENYAMDLQFEQVSR  QGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
A0A5D3D2Q6 Retrotransposable element Tf26.0e-2777.17Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP GRQ P NQRQPL N+ N NPQ PP++VA+SSGTT  R+KSP QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
A0A5D3DX32 Retrotransposable element Tf21.8e-2371.74Show/hide
Query:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
        MEPP  RQ PPN+RQP  NN N +   PP++VASSSGTT  R++ P+QSS PSPMS ENYAMDLQFEQVSR RQGSA R LTIQ+DSSSLPP
Subjt:  MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCCTTCCGGCCGGCAATGGCCACCCAACCAGCGGCAACCGCTGCTAAATAATCCAAACAAAAATCCTCAAGGACCACCTCGAACAGTAGCTTCCTCTTCAGG
AACTACTTCTCCCAGGGAAAAATCCCCGACTCAATCATCTACACCGTCACCGATGAGTGTAGAAAACTATGCCATGGATTTACAATTTGAGCAAGTATCCAGGTGTCGTC
AAGGCTCTGCTAACAGAGCATTGACAATCCAAACAGACTCTTCGAGTCTTCCCCCCCATACCTTCAAGCACGTTGTTGCGACCTTCTGGGCCGACAACTCCAAACAAGCG
TGTCGCATCATCGGTCGCTTCCTCCTCAAGGTCTGCAATTCCATGGAATCCATCCTCGTATTCCCAGATTGTACGACCAAAAGTCTTCCAGCCAAGACCACCAATTACTG
GTTATTTCACCAAAACAACAACGGTGGATTTGACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTCCTTCCGGCCGGCAATGGCCACCCAACCAGCGGCAACCGCTGCTAAATAATCCAAACAAAAATCCTCAAGGACCACCTCGAACAGTAGCTTCCTCTTCAGG
AACTACTTCTCCCAGGGAAAAATCCCCGACTCAATCATCTACACCGTCACCGATGAGTGTAGAAAACTATGCCATGGATTTACAATTTGAGCAAGTATCCAGGTGTCGTC
AAGGCTCTGCTAACAGAGCATTGACAATCCAAACAGACTCTTCGAGTCTTCCCCCCCATACCTTCAAGCACGTTGTTGCGACCTTCTGGGCCGACAACTCCAAACAAGCG
TGTCGCATCATCGGTCGCTTCCTCCTCAAGGTCTGCAATTCCATGGAATCCATCCTCGTATTCCCAGATTGTACGACCAAAAGTCTTCCAGCCAAGACCACCAATTACTG
GTTATTTCACCAAAACAACAACGGTGGATTTGACCATTGA
Protein sequenceShow/hide protein sequence
MEPPSGRQWPPNQRQPLLNNPNKNPQGPPRTVASSSGTTSPREKSPTQSSTPSPMSVENYAMDLQFEQVSRCRQGSANRALTIQTDSSSLPPHTFKHVVATFWADNSKQA
CRIIGRFLLKVCNSMESILVFPDCTTKSLPAKTTNYWLFHQNNNGGFDH