; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI02G27190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G27190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationChr2:23200938..23202191
RNA-Seq ExpressionCSPI02G27190
SyntenyCSPI02G27190
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.3e-1049.41Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA
        MTV EYEKKYT+LSKYAT VI DE +RCKRFEEGLRE+IRTPV+           ++++L  E +L  R      + + + +SS+
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA

KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.1e-1086.05Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV
        MTVVEYEK YT+LSKYATSVIEDEA RCKRF+EGLR++IRTPV
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]5.3e-1049.41Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA
        MTV EYEKKYT+LSKYAT VI DE +RCKRFEEGLRE+IRTPV+           ++++L  E +L  R      + + + +SS+
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA

TYK26763.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.1e-1086.05Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV
        MTVVEYEK YT+LSKYATSVIEDEA RCKRF+EGLR++IRTPV
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV

XP_031736572.1 uncharacterized protein LOC116402027 [Cucumis sativus]6.2e-3597.5Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS
        MTVVEYEKKYTKLSKYATS+IEDEAKRCKRFEEGLREKIRTP+SRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS

TrEMBL top hitse value%identityAlignment
A0A0A0LR88 Uncharacterized protein3.0e-3597.5Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS
        MTVVEYEKKYTKLSKYATS+IEDEAKRCKRFEEGLREKIRTP+SRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS

A0A5A7T1M0 Reverse transcriptase2.6e-1049.41Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA
        MTV EYEKKYT+LSKYAT VI DE +RCKRFEEGLRE+IRTPV+           ++++L  E +L  R      + + + +SS+
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA

A0A5A7TG44 DNA/RNA polymerases superfamily protein1.5e-1086.05Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV
        MTVVEYEK YT+LSKYATSVIEDEA RCKRF+EGLR++IRTPV
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV

A0A5D3BB91 Reverse transcriptase2.6e-1049.41Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA
        MTV EYEKKYT+LSKYAT VI DE +RCKRFEEGLRE+IRTPV+           ++++L  E +L  R      + + + +SS+
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRID--------LDISLNAEPTLYIRCTYYTCTNSKKIYSSA

A0A5D3DT34 DNA/RNA polymerases superfamily protein1.5e-1086.05Show/hide
Query:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV
        MTVVEYEK YT+LSKYATSVIEDEA RCKRF+EGLR++IRTPV
Subjt:  MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTTGTTGAATATGAGAAGAAGTATACAAAATTGTCTAAGTATGCCACCAGTGTGATTGAGGATGAGGCTAAAAGGTGCAAGCGATTTGAAGAGGGATTACGAGA
GAAAATTCGTACTCCCGTGAGTAGGATAGATTTGGACATAAGCTTAAATGCAGAACCAACACTATATATACGATGTACCTATTATACATGTACTAATTCAAAGAAGATAT
ACTCAAGTGCAAGAGCCTCATGA
mRNA sequenceShow/hide mRNA sequence
AATTAATAAAAAAAAAAAAAAAAATCACTTTCTCTCCATCTCCACAAACAATCCCACCCTCCACCCCAAACCTCTCTTGCGAAGGCCTCCATTGATTCGCCCCACCCTCT
ACCGCTTTGTCGTCCGCCTCCATTGGCATTTGGTGTGCGACTTGGACTTTCACCCTCTGCTTTGTCGTCCCACCCTTTGCCACATGTCGAGACGATCAGGGAGAAGAGAG
ATGGCTTGCTGTGCGAATTGGACCTTTCACATGTCGGTGTTTGACGTCACTACAGTGTGCTCCAAGACTCCCTTGGTCGTCGACGTTGGTTATGCTTTTGTGGCCGAAAC
GAAATCTAATAGTTTTATCTGCGCTCTTTCCGTGATGAAAAACGAAGTGAGTTCTTGAAGCTCACTCAGAGTTCAATGACTGTTGTTGAATATGAGAAGAAGTATACAAA
ATTGTCTAAGTATGCCACCAGTGTGATTGAGGATGAGGCTAAAAGGTGCAAGCGATTTGAAGAGGGATTACGAGAGAAAATTCGTACTCCCGTGAGTAGGATAGATTTGG
ACATAAGCTTAAATGCAGAACCAACACTATATATACGATGTACCTATTATACATGTACTAATTCAAAGAAGATATACTCAAGTGCAAGAGCCTCATGAATTTGTACATTT
CGTACACTATAATACACTTTGTATTATATATACACTACAATACACTTTGTAATATTCGTACATTTTCAATCAAGTTTGAACAATTTATCAAACCAGAG
Protein sequenceShow/hide protein sequence
MTVVEYEKKYTKLSKYATSVIEDEAKRCKRFEEGLREKIRTPVSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS