CuGenDBv2

Gene ID	CSPI02G27360
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	S5 DRBM domain-containing protein
Genome location	Chr2:23363966..23367138
RNA-Seq Expression	CSPI02G27360
Synteny	CSPI02G27360
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005840 - ribosome (cellular component) GO:1990904 - ribonucleoprotein complex (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004386 - helicase activity (molecular function)
InterPro domains	IPR000851 - Ribosomal protein S5 IPR013810 - Ribosomal protein S5, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0066311.1 putative 37S ribosomal protein S5 [Cucumis melo var. makuwa]

5.0e-213

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KIS LQR PI+KISKISLTRCYSTAHSRVVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCL Y
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY

KAG7011014.1 rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-186

85.07

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQN IKTPLHIS KIS LQRFP E+  K   TRCYSTA +RVV DLLAEVEKEK+REREQR RAGLDTKDID+ED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKL+K+N + TG+LNAYEE +DSDSD DDERFS ESV+KRF+ F++KF+RH+ELLK+FT+ DNIDDAFKWMSKID+FEQKHF+LRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGI-DDDDEEEFDDMKERDDILLEKLNAIDKKLE
        NRLKVA+GKEKF+LQQKLNRAMR+VEWKEAYDPNNPANYG IQ  Q GPSV+L E+S F K+KQ IQG+ DDDDEEEFDDMKERDDILLEKLNAIDKKLE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGI-DDDDEEEFDDMKERDDILLEKLNAIDKKLE

Query:  EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLP
        EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG+VVKY+A+LACGNYHGIVGYA AKGPAVPIALQKACCL 
Subjt:  EKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLP

Query:  YS
        YS
Subjt:  YS

XP_004151847.1 probable 37S ribosomal protein S5, mitochondrial [Cucumis sativus]

8.2e-216

99.75

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

XP_008462792.1 PREDICTED: probable 37S ribosomal protein S5, mitochondrial [Cucumis melo]

4.0e-210

97.22

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KIS LQR PI+KISKISLTRCYSTAHSRVVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

XP_038902106.1 uncharacterized protein LOC120088744 [Benincasa hispida]

1.3e-184

86.08

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQN IKTPLHIS K S   RFP E+I KIS TRCYSTA +RVV DLLAEVEKEK+REREQR+RAG+DTKDID+ED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKL+K+  + TGDLNAYEEP+DSDSD DDERFS ESV+KRF++F++KF+RH+ELLKNFT  +NIDDAFKWMSKIDRFEQKHF+LRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKF+LQQKLNRAMRIVEWKEAYDPNNPANYG IQ  Q GPS +L E+S F K++QTIQ  DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTA+LACGNYHGIVGYATAKGPA+PIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF1 S5 DRBM domain-containing protein

2.3e-227

99.52

Show/hide

Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY

Query:  SLDSFSSSFSFIEI
        S+DSFSSSFSFIEI
Subjt:  SLDSFSSSFSFIEI

A0A1S3CJC3 probable 37S ribosomal protein S5, mitochondrial

1.9e-210

97.22

Show/hide

Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KIS LQR PI+KISKISLTRCYSTAHSRVVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

A0A5A7VKZ9 Putative 37S ribosomal protein S5

2.4e-213

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KIS LQR PI+KISKISLTRCYSTAHSRVVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCL Y
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPY

A0A5D3BRU3 Putative 37S ribosomal protein S5

1.9e-210

97.22

Show/hide

Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQNLIKTPLHIS KIS LQR PI+KISKISLTRCYSTAHSRVVHDLLAEVEKEKKRERE RIRAGLDTKDIDNEDEEDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSD DDERFS ESVRKRF+NFQ+KFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPN+PANYGAIQRRQGGPSVNLEE+SEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

A0A6J1FXC7 DEAD-box ATP-dependent RNA helicase 42

4.4e-183

84.56

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Query:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG
        MVNKSQAFSWSRLLLNQVVHQN IKTPLHIS +IS LQRFP E+  K   TRCYSTA +RVV DLLAEVEKEK+REREQR RAGLDTKDID+ED EDYMG
Subjt:  MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMG

Query:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM
        VGPLIEKL+K+  + TG+LNAYEE +DSDSD DDERFS ESV+KRF+ F++KF+RH+ELLK+FT+ DNIDDAFKWMSKID+FEQKHF+LRPEYRVIGELM
Subjt:  VGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELM

Query:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE
        NRLK+A+GKEKF+LQQKLNRAMR+VEWKEAYDPNNPANYG IQ  Q GPSV+L E+S F K+KQ IQG+DDDDEEEFDDMKERDDILLEKLNAIDKKLEE
Subjt:  NRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEE

Query:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGG+VVKY+A+LACGNYHGIVGYA AKGPAVPIALQKA
Subjt:  KLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

SwissProt top hits

e value

%identity

Alignment

A1AVL7 30S ribosomal protein S5

8.5e-06

41.82

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Query:  KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        K +  KL+++ R  KV KGG++  ++A++  G+ +G VGY T K   VP+A+QKA
Subjt:  KGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

A6U3V8 30S ribosomal protein S5

1.1e-05

39.34

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Query:  RRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        RR    K F+ +++ +NR  KV KGG+  ++TA++  G+ +G VG+ T K   VP A++KA
Subjt:  RRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

A7X5D8 30S ribosomal protein S5

1.1e-05

39.34

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Query:  RRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        RR    K F+ +++ +NR  KV KGG+  ++TA++  G+ +G VG+ T K   VP A++KA
Subjt:  RRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

P10128 30S ribosomal protein S5

1.7e-06

38.16

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Query:  EERNSLTEKKRRPLYRK-----GFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        +E N   E+K RP  R+      F+ K++ + R  KVTKGG+  ++ A++  GN  G+VG  T K   VP A++KA
Subjt:  EERNSLTEKKRRPLYRK-----GFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

Q50301 30S ribosomal protein S5

8.5e-06

31.88

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Query:  RNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        RN+   + ++P ++  F+ +++ + R  K TKGG+ ++++ ++  GN  G +GY  AK   VP A++KA
Subjt:  RNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

Arabidopsis top hits

e value

%identity

Alignment

AT1G64880.1 Ribosomal protein S5 family protein

1.8e-120

59.32

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Query:  KSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQR----------FPIEKISKISLTRCYSTAHS--------RVVHDLLAEVEKEKKREREQRIRAGL
        +++A SW RLLL +    +  +    +    S   R          FP+ +   IS  R    + S        RVV +L+AEVEKEK+RERE+R R GL
Subjt:  KSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQR----------FPIEKISKISLTRCYSTAHS--------RVVHDLLAEVEKEKKREREQRIRAGL

Query:  DTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQK
        D KDID EDEEDY+G+ P IEKL K+N +  G+LN  EE SDSDS+ D+     E  RK+ + F KKF+RHKELL+  T ++ +D+AF+WM+K+D+FE+K
Subjt:  DTKDIDNEDEEDYMGVGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQK

Query:  HFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRR--QGGPSVNLEERSE-FAKQKQTIQGIDDDDEEEFDDMKE
        HF+LRPEYRVIGELMNRLKVAEGKEKF+LQQKLNRAMR+VEWKEA+DPNNPANYG I+R   QGG     EER E            DDDDEEEFDDMKE
Subjt:  HFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRR--QGGPSVNLEERSE-FAKQKQTIQGIDDDDEEEFDDMKE

Query:  RDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYAT
        RDDILLEKLNAIDKKLE KL+ELDHTFGKKGK LEEEIR+LAE+RN+LTEKKR+PLYRKG+DV +IDV + CKVTKGG+V +YTA++ CGNY GI+GYA 
Subjt:  RDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSLTEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYAT

Query:  AKGPAVPIALQKA
        AK      A+QKA
Subjt:  AKGPAVPIALQKA

AT2G33800.1 Ribosomal protein S5 family protein

6.7e-06

39.68

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Query:  KKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA
        K ++   R GF+ +++ V R  KV KGGK +K+ AI+  G+  G VG   AK   V  A+QK+
Subjt:  KKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKA

Sequences

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CDS sequence

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ATGGTGAACAAGTCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCCCAAAATCTCCGGTCT
CCAACGCTTCCCTATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGA
AGAGAGAAAGGGAGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAG
AAAAATTCAAGGGTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGA
AAACTTTCAGAAGAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGC
AAAAACACTTCCAGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGG
GCTATGCGAATAGTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATC
AGAATTTGCAAAACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTA
TAGATAAGAAACTCGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTA
ACTGAGAAGAAGAGAAGGCCACTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGGTGGAAAAGTTGTCAAATACACTGC
TATCTTGGCTTGTGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCATGTTGCTTGCCCTATTCACTAGATT
CCTTTTCTTCCTCATTTAGTTTTATTGAAATTTGA

mRNA sequence

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TCCCTATTCATATTTCTTTTACCGTCCCTTTTCTTCCTTCTCTTCCTTACCCCAGCCGCACGCCCCATCGGCACCTTCCTTCTCTCCTACCGGTATCTCCATTGCTTCCC
AACGCCACCACACTCATCAACCTTCCATCCCCCCGCTTCCCATCTCTCTCTCTCTCTCTCAACTACTTCCGTCGCCGGCCGCCGGCACCCACCACACCCATAACTTAATG
TCGTTTTCTAGGAAAAGAATTTGATTGAATTGAATGGTTTGAACATTTTACGCATGTGAGACGGTTTAGTTGTGTGATTGAAGTTTAGGCTCAAAGAAATGGTGAACAAG
TCGCAAGCATTTTCTTGGTCGCGTCTCCTTCTCAACCAGGTCGTTCACCAAAACCTCATCAAAACCCCACTTCATATTTCCCCCAAAATCTCCGGTCTCCAACGCTTCCC
TATCGAGAAAATTTCGAAGATTTCGTTGACGCGGTGTTACTCCACTGCTCATTCTAGAGTTGTGCATGATCTTCTCGCTGAGGTGGAGAAGGAGAAGAAGAGAGAAAGGG
AGCAGAGGATAAGGGCTGGCCTTGATACCAAGGATATTGACAATGAAGATGAAGAGGATTATATGGGTGTTGGGCCATTGATAGAGAAGCTCGACAAGAAAAATTCAAGG
GTCACTGGGGACTTGAACGCCTATGAAGAACCCTCTGATTCTGATAGTGATGCAGACGATGAAAGGTTTAGTAGAGAATCTGTCAGAAAGAGGTTTGAAAACTTTCAGAA
GAAATTCGAGAGGCACAAGGAATTGCTGAAGAACTTCACTGATGCTGATAACATTGATGATGCTTTCAAATGGATGAGTAAAATCGACAGGTTTGAGCAAAAACACTTCC
AGCTTCGTCCTGAATATCGGGTAATTGGTGAATTAATGAACCGCTTGAAAGTAGCGGAGGGAAAGGAAAAGTTCATGCTTCAGCAGAAATTAAATAGGGCTATGCGAATA
GTGGAGTGGAAGGAAGCTTATGACCCAAATAATCCTGCCAACTATGGTGCCATTCAACGTAGACAAGGAGGTCCATCAGTTAATCTCGAGGAACGATCAGAATTTGCAAA
ACAGAAGCAAACCATACAGGGGATTGATGATGATGATGAGGAAGAGTTTGATGACATGAAAGAAAGGGATGATATACTACTGGAGAAGCTCAATGCTATAGATAAGAAAC
TCGAAGAGAAGCTAGCAGAGCTGGATCATACCTTTGGAAAGAAAGGGAAGGTTCTAGAAGAGGAAATCCGAGATCTTGCAGAGGAGAGAAACTCGTTAACTGAGAAGAAG
AGAAGGCCACTTTATCGAAAAGGCTTTGATGTGAAATTAATTGATGTGAACAGAACTTGTAAAGTTACAAAGGGTGGAAAAGTTGTCAAATACACTGCTATCTTGGCTTG
TGGGAACTACCATGGCATTGTTGGTTATGCAACAGCCAAAGGACCGGCAGTCCCGATTGCTTTACAAAAGGCATGTTGCTTGCCCTATTCACTAGATTCCTTTTCTTCCT
CATTTAGTTTTATTGAAATTTGA

Protein sequence

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MVNKSQAFSWSRLLLNQVVHQNLIKTPLHISPKISGLQRFPIEKISKISLTRCYSTAHSRVVHDLLAEVEKEKKREREQRIRAGLDTKDIDNEDEEDYMGVGPLIEKLDK
KNSRVTGDLNAYEEPSDSDSDADDERFSRESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGELMNRLKVAEGKEKFMLQQKLNR
AMRIVEWKEAYDPNNPANYGAIQRRQGGPSVNLEERSEFAKQKQTIQGIDDDDEEEFDDMKERDDILLEKLNAIDKKLEEKLAELDHTFGKKGKVLEEEIRDLAEERNSL
TEKKRRPLYRKGFDVKLIDVNRTCKVTKGGKVVKYTAILACGNYHGIVGYATAKGPAVPIALQKACCLPYSLDSFSSSFSFIEI

CSPI02G27360 (gene) of Cucumber (PI 183967) v1 genome