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CSPI02G27400 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G27400
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNB-ARC domain-containing protein
Genome locationChr2:23401817..23402626
RNA-Seq ExpressionCSPI02G27400
SyntenyCSPI02G27400
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652339.1 hypothetical protein Csa_022544 [Cucumis sativus]1.8e-10288.24Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        MELSLK VKKRFCQKSESFSELI LKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH
        S      SFDSLENIDIRGCENLKCIL SSVTFLNLKYL VG C+KMMNLFSS+VAENLGNLE+T I++CREMRCIVAAEEGEEENGEIV K+LK I L+
Subjt:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH

Query:  GLPRLACFHNGKCTITFPWLE
        GLPRLA F NGKCTI FP LE
Subjt:  GLPRLACFHNGKCTITFPWLE

XP_011659043.1 probable disease resistance protein At4g27220 isoform X1 [Cucumis sativus]4.2e-9669.74Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        ++LSLK VKK F QK ESFSEL  L+L GCEDDDIVCLPLEM EVLYN E+  I++  +L+QVFE EELSR NN+DVQRC +LK LTL NLPKLMHVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH
        S      SFDSLE I+IR CENLKCIL SSVTFLNLK+L + EC+KMMNLFSS+VAE L NLE+  +  C EMRCIV  E GEEENGEIV KNLK I L 
Subjt:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH

Query:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY
        GLPRLACFHNGKC I FP LE   I    YE ETFSHGILSFP LKSM+I++ EFKI+PGQDIN II   +
Subjt:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY

XP_031744706.1 probable disease resistance protein At4g27220 isoform X2 [Cucumis sativus]4.2e-9669.74Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        ++LSLK VKK F QK ESFSEL  L+L GCEDDDIVCLPLEM EVLYN E+  I++  +L+QVFE EELSR NN+DVQRC +LK LTL NLPKLMHVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH
        S      SFDSLE I+IR CENLKCIL SSVTFLNLK+L + EC+KMMNLFSS+VAE L NLE+  +  C EMRCIV  E GEEENGEIV KNLK I L 
Subjt:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH

Query:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY
        GLPRLACFHNGKC I FP LE   I    YE ETFSHGILSFP LKSM+I++ EFKI+PGQDIN II   +
Subjt:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY

XP_031744707.1 uncharacterized protein LOC101213664 isoform X3 [Cucumis sativus]4.2e-9669.74Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        ++LSLK VKK F QK ESFSEL  L+L GCEDDDIVCLPLEM EVLYN E+  I++  +L+QVFE EELSR NN+DVQRC +LK LTL NLPKLMHVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH
        S      SFDSLE I+IR CENLKCIL SSVTFLNLK+L + EC+KMMNLFSS+VAE L NLE+  +  C EMRCIV  E GEEENGEIV KNLK I L 
Subjt:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH

Query:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY
        GLPRLACFHNGKC I FP LE   I    YE ETFSHGILSFP LKSM+I++ EFKI+PGQDIN II   +
Subjt:  GLPRLACFHNGKCTITFPWLEGFYI-YGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRY

XP_038900321.1 uncharacterized protein LOC120087577 [Benincasa hispida]2.2e-6854.89Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        +EL LK VK+ F  K  SF +L  L+LIGCEDDD+VCLP E+SEVLYNI  F IE+A +L+ VFE E L  + NN VQRCA+LK++ LW+LPKL HVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH
        S      S DSLE++++R CENLKCI+ SS +FLNL+ L V  C++M+NLFSS+VA NL NLE  +I DC  M  IV A   +EENGEI+ K L+ + L 
Subjt:  S------SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLH

Query:  GLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAII
         LPRL  F++GKC + FP LE   I+   + ETFS G++S   L+SM I + EF I+P +DIN II
Subjt:  GLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAII

TrEMBL top hitse value%identityAlignment
A0A0A0K5R3 NB-ARC domain-containing protein7.7e-4342.91Show/hide
Query:  VKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKESSFDSLE
        VK+RF   S+ F +L  L+L GCED  ++ LP+EM+EVLY+IEE  I    +L+ V         N+  +QRCA LKKL L+NLPKLM+V K  +     
Subjt:  VKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKESSFDSLE

Query:  NIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAE-EGEEENGEIVLKNLKRIFLHGLPRLACFHNGK
                       ++ TF  L YL VG C+ M+NLFS +VA+NL NL + +IYDC EMR +VAA+ E EEEN EIV   L  +  H L  L CF+ GK
Subjt:  NIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAE-EGEEENGEIVLKNLKRIFLHGLPRLACFHNGK

Query:  CTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKI-DKREFKIAPGQDINAIIHKRYRI
        CT+ FP L+   I    + + FS+GI + P LK+++I +     + P Q IN IIH  + I
Subjt:  CTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKI-DKREFKIAPGQDINAIIHKRYRI

A0A0A0LNF6 Uncharacterized protein3.3e-3882Show/hide
Query:  MMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKS
        MMNLFSS+VAENLGNLE+T I++CREMRCIVAAEEGEEENGEIV K+LK I L+GLPRLA F NGKCTI FP LE  YIYG YE ETFSHGILSFPKLKS
Subjt:  MMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKS

A0A0A0LQT7 Uncharacterized protein5.5e-4990.52Show/hide
Query:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
        MELSLK VKKRFCQKSESFSELI LKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE
Subjt:  MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKE

Query:  S------SFDSLENID
        S      SFDSLE ++
Subjt:  S------SFDSLENID

A0A0A0LTN4 NB-ARC domain-containing protein1.8e-3135.91Show/hide
Query:  SFSELIYLKLIGCED-DDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKES-----SFDSLENIDI
        SF EL  L ++G  + + +       + VL+++ E  + +   L QV+  + +       +     LK++ +    KL HVWK++     SFDSLE I++
Subjt:  SFSELIYLKLIGCED-DDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKES-----SFDSLENIDI

Query:  RGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIV-LKNLKRIFLHGLPRLACFHNGKCTIT
          C+NLK +L SS+ FLNLK L + +C+ M+NLFSSTV + L NL + K+  C+ MRC+V  E  + EN EI+  K L  + L  LPRL  F++GKC + 
Subjt:  RGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIV-LKNLKRIFLHGLPRLACFHNGKCTIT

Query:  FPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKI-APGQDINAIIHKRYRIII
        FP LE   I    E +TFS+G++  P+L+++ ++ +EF + +P   IN  I    R ++
Subjt:  FPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKI-APGQDINAIIHKRYRIII

A0A1S3CHN4 disease resistance protein At4g27190-like5.0e-3447.43Show/hide
Query:  LKKLTLWNLPKLMHVWKES-----SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGE
        LK++ +    KL HVWK++     SFDSLE I++  C+NLK +L SS+TFLNLK L + +C+ MMNLFSSTV + L NL + K+  C+ MRC+V  E  +
Subjt:  LKKLTLWNLPKLMHVWKES-----SFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGE

Query:  EENGE-IVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKIA
        EEN E IV K L R+ L  LPRL  FH+GKC + FP LE   I    E +TFS+G++  P+L SM ++ + F ++
Subjt:  EENGE-IVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIYGLYETETFSHGILSFPKLKSMKIDKREFKIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69550.1 disease resistance protein (TIR-NBS-LRR class)1.1e-0426Show/hide
Query:  SFSELIYLK---LIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQV-FETEELSRSNNNDVQRCARLKKL--TLWNLPKLMHVWKE-----------
        S   LI LK   L GC    +V LPL +   L N++E  + +   L+++      L      ++  C+ L +L  ++ NL  L  ++             
Subjt:  SFSELIYLK---LIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQV-FETEELSRSNNNDVQRCARLKKL--TLWNLPKLMHVWKE-----------

Query:  -SSFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRL
          +  +L+ +D+ GC +L  +  S    +NLK L + ECS ++ L SS    NL NL+   + +C  +       E     G ++  NLK++ L G   L
Subjt:  -SSFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRL

AT5G38850.1 Disease resistance protein (TIR-NBS-LRR class)4.1e-0434.74Show/hide
Query:  QRCARLKKLTL---WNLPKLMHVWKESSFDSLENIDIRGCENLKCILASSVTFLN-LKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMR
        Q  A LKK++L   W L KL  +   S+  +LE +D+R C+NL   L SS ++L+ LKYL +  C ++  +       NL +LE   +Y C  ++
Subjt:  QRCARLKKLTL---WNLPKLMHVWKESSFDSLENIDIRGCENLKCILASSVTFLN-LKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMR

AT5G46450.1 Disease resistance protein (TIR-NBS-LRR class) family5.7e-0631.33Show/hide
Query:  KLMHVWK-ESSFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRI
        KL  +W    S   L N+D+RG ENLK I   S+   NLK L V  C+ ++ L SST+ +NL  LE  ++  C  +  +            I L++L  +
Subjt:  KLMHVWK-ESSFDSLENIDIRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRI

Query:  FLHGLPRLACFHNGKCTIT-----------FP---WLEGFYIYGLYETET
         L+G  +L  F +   TI+           FP    LE  Y  GLY+ ++
Subjt:  FLHGLPRLACFHNGKCTIT-----------FP---WLEGFYIYGLYETET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGAGCTTGAAACCAGTGAAGAAAAGGTTTTGCCAAAAATCAGAATCATTCTCCGAACTCATATATCTTAAACTCATTGGTTGTGAGGATGATGACATAGTTTG
TTTGCCATTGGAAATGAGTGAAGTATTGTACAATATTGAAGAATTTATAATCGAAGATGCTCGTAAGCTGATACAAGTGTTTGAAACTGAAGAATTAAGTAGAAGCAATA
ATAATGATGTTCAAAGATGTGCAAGGTTGAAGAAGTTGACATTATGGAATCTTCCAAAGCTTATGCATGTGTGGAAAGAAAGTAGCTTTGATAGTTTGGAAAACATTGAC
ATACGGGGATGTGAGAATTTGAAGTGCATATTGGCATCCTCAGTCACATTCCTAAATTTGAAGTATCTGACGGTCGGAGAATGCAGTAAAATGATGAACTTGTTTAGCTC
TACGGTGGCAGAAAATCTGGGAAATTTGGAGACTACTAAAATATATGATTGTAGAGAAATGAGATGTATAGTTGCAGCAGAAGAAGGAGAAGAAGAAAATGGTGAAATTG
TTTTAAAAAACCTGAAACGTATCTTCTTACATGGCTTACCAAGACTAGCATGCTTTCACAATGGAAAATGTACGATTACGTTTCCATGGTTGGAGGGATTTTACATATAT
GGATTGTATGAAACGGAGACATTTTCACATGGAATACTAAGCTTCCCCAAATTGAAATCCATGAAGATAGATAAACGTGAATTTAAAATCGCGCCAGGGCAAGACATAAA
TGCTATTATCCATAAGAGGTACAGAATTATAATTATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGAGCTTGAAACCAGTGAAGAAAAGGTTTTGCCAAAAATCAGAATCATTCTCCGAACTCATATATCTTAAACTCATTGGTTGTGAGGATGATGACATAGTTTG
TTTGCCATTGGAAATGAGTGAAGTATTGTACAATATTGAAGAATTTATAATCGAAGATGCTCGTAAGCTGATACAAGTGTTTGAAACTGAAGAATTAAGTAGAAGCAATA
ATAATGATGTTCAAAGATGTGCAAGGTTGAAGAAGTTGACATTATGGAATCTTCCAAAGCTTATGCATGTGTGGAAAGAAAGTAGCTTTGATAGTTTGGAAAACATTGAC
ATACGGGGATGTGAGAATTTGAAGTGCATATTGGCATCCTCAGTCACATTCCTAAATTTGAAGTATCTGACGGTCGGAGAATGCAGTAAAATGATGAACTTGTTTAGCTC
TACGGTGGCAGAAAATCTGGGAAATTTGGAGACTACTAAAATATATGATTGTAGAGAAATGAGATGTATAGTTGCAGCAGAAGAAGGAGAAGAAGAAAATGGTGAAATTG
TTTTAAAAAACCTGAAACGTATCTTCTTACATGGCTTACCAAGACTAGCATGCTTTCACAATGGAAAATGTACGATTACGTTTCCATGGTTGGAGGGATTTTACATATAT
GGATTGTATGAAACGGAGACATTTTCACATGGAATACTAAGCTTCCCCAAATTGAAATCCATGAAGATAGATAAACGTGAATTTAAAATCGCGCCAGGGCAAGACATAAA
TGCTATTATCCATAAGAGGTACAGAATTATAATTATATAG
Protein sequenceShow/hide protein sequence
MELSLKPVKKRFCQKSESFSELIYLKLIGCEDDDIVCLPLEMSEVLYNIEEFIIEDARKLIQVFETEELSRSNNNDVQRCARLKKLTLWNLPKLMHVWKESSFDSLENID
IRGCENLKCILASSVTFLNLKYLTVGECSKMMNLFSSTVAENLGNLETTKIYDCREMRCIVAAEEGEEENGEIVLKNLKRIFLHGLPRLACFHNGKCTITFPWLEGFYIY
GLYETETFSHGILSFPKLKSMKIDKREFKIAPGQDINAIIHKRYRIIII