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CSPI02G27430 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G27430
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationChr2:23427544..23431884
RNA-Seq ExpressionCSPI02G27430
SyntenyCSPI02G27430
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151845.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis sativus]4.0e-52100Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_008462784.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo]2.2e-5097.09Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]3.0e-4791.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]1.0e-4792.23Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]2.7e-4893.2Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS RNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein2.0e-52100Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.1e-5097.09Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.5e-4789.32Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.5e-4791.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.9e-4791.26Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG
        MASSLFK L+ESSS  PSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQG

Query:  HHH
        HHH
Subjt:  HHH

SwissProt top hitse value%identityAlignment
P23934 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial3.2e-0738.46Show/hide
Query:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH
        ++ ++   ++LI E P  +V  R+++C+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH

P52504 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial7.0e-0740Show/hide
Query:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH
        ++ ++   ++LI + P  +V  RI+AC+G    ALGHP  +I LD+E +   C YCGL++ Q HH
Subjt:  QDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRYTQGHH

Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.9e-3869.37Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH

Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related4.2e-3969.37Show/hide
Query:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+EVPPIKV GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKVLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQGHHH
        CGLRY Q HHH
Subjt:  CGLRYTQGHHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTTTTTTCTTTTTCTGAATTTCTTTTTGTCATCAAATTTTCTTTTATTTTAACTCCTTATTTATTTTCGAAAAAAAAGAAAAGTTATATTCGTGGTTTTTACTC
TAACCTTTCCCCGGCCATAGCTCTTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCTCAGGTTGTGCGCATCGGCGGATCAATGGCGTCGAGTCTGTTCAAAG
TGCTTCTTGAATCTTCTTCTAACATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAA
TCACCCATGGAGTTGATCAATGAGGTTCCACCAATTAAGGTTGCAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATG
CCTTGATCGGGAAGAGCCTGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGGCCATCACCACTAG
mRNA sequenceShow/hide mRNA sequence
TTGCAATATTAGTGAAAGAGTTAATGTGTTTTTTTTCTTTTTCTGAATTTCTTTTTGTCATCAAATTTTCTTTTATTTTAACTCCTTATTTATTTTCGAAAAAAAAGAAA
AGTTATATTCGTGGTTTTTACTCTAACCTTTCCCCGGCCATAGCTCTTCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCTCAGGTTGTGCGCATCGGCGGATC
AATGGCGTCGAGTCTGTTCAAAGTGCTTCTTGAATCTTCTTCTAACATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAAT
GGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATTAAGGTTGCAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTT
GGACATCCAATCGAGTTCATATGCCTTGATCGGGAAGAGCCTGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGGCCATCACCACTAGAAAATGTGCAAATGATT
ATTCCAGCAAGCAACCCAGAACTTGGAAAGACTATCCTACCTCTCTAAACTCAGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCAT
TCACTAAGCACTTCGGCCGGTCCATTGTCGTTTGCCAAATTTGTTCTATTGCACTGTCTAGTGAACATATCTTGTTGATTCTAATACGCAATAAAAGGTTTTAGATCTCT
TGGGAGTTGCAAGCTTGAAATTGGATTTTTTTATAAGATCACCATTTTTAAGGGCACAAATGTTCATTTGGCTCAGTGGTGTTTGAAATCAAATGAAATTTGTTCTTTCG
TACGTAAATCTTGTTTCTTCCTCATTTTGATCTTTTTCCTCATCAAACTTGC
Protein sequenceShow/hide protein sequence
MCFFSFSEFLFVIKFSFILTPYLFSKKKKSYIRGFYSNLSPAIALRALSLSLSLSLSAQVVRIGGSMASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKK
SPMELINEVPPIKVAGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH