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CSPI02G27730 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI02G27730
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAnaphase-promoting complex subunit 13
Genome locationChr2:23732186..23734904
RNA-Seq ExpressionCSPI02G27730
SyntenyCSPI02G27730
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0070979 - protein K11-linked ubiquitination (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008401 - Apc13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042977.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]1.8e-7090.97Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

KGN63398.1 hypothetical protein Csa_022587 [Cucumis sativus]4.9e-7699.32Show/hide
Query:  APVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE
        +PVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE
Subjt:  APVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE

Query:  WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Subjt:  WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

TYK11109.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]2.0e-6990.32Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

XP_004148091.1 anaphase-promoting complex subunit 13 [Cucumis sativus]4.2e-27100Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

XP_008459198.1 PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]2.8e-7190.51Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNL0 Anaphase-promoting complex subunit 132.4e-7699.32Show/hide
Query:  APVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE
        +PVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE
Subjt:  APVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDEE

Query:  WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
Subjt:  WMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

A0A1S3CA59 Anaphase-promoting complex subunit 131.3e-7190.51Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

A0A5A7TMF9 Anaphase-promoting complex subunit 138.7e-7190.97Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL  HPSLSSL ARFPR HSSSSV HYSLTTH HSRSLRPLVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A5D3CLL3 Anaphase-promoting complex subunit 139.7e-7090.32Show/hide
Query:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS
        MVLRVPK EDTAPVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELS
Subjt:  MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLAL

A0A6J1JH61 Anaphase-promoting complex subunit 138.6e-2695.24Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE QPVD DTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

SwissProt top hitse value%identityAlignment
Q8L981 Anaphase-promoting complex subunit 134.0e-2073.02Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ

Arabidopsis top hitse value%identityAlignment
AT1G73177.1 bonsai2.8e-2173.02Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQETQ  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTGCGTGTGCCTAAGGCAGAAGACACCGCCCCCGTCCTCAACTTCCCGCCTCAATTGAACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTG
CCATTCCTCTTCATCAGTCACCCACTACTCGCTCACGACTCATCGACATTCCAGATCGCTCAGGCCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCG
CCCTTCGATCCTTGACTCCAACGTTGATATTGGGTTTTAGAATCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAG
GAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATAC
TGATACTTGGCATGATCTTGCCCTAGGTAACCAATGA
mRNA sequenceShow/hide mRNA sequence
GTATAGTTTGTAGAAGAAATTACATACCTTTTCTTTCAGTTCCTTTGCCACTCCATATTTTCGGTCTCCTCTGCTTTACTCACCCACTCAAACTCTCAGCATTTCAAACA
AGAACTTAGGCTTTAAAAGCCCAAAGTTGGCCTACTTTAGAAATGGATGGTACTGCGTGTGCCTAAGGCAGAAGACACCGCCCCCGTCCTCAACTTCCCGCCTCAATTGA
ACCTTCATCCGTCTTTGTCGTCCCTTCACGCAAGATTTCCACGCTGCCATTCCTCTTCATCAGTCACCCACTACTCGCTCACGACTCATCGACATTCCAGATCGCTCAGG
CCACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATTCGGTCTCCGCCCTTCGATCCTTGACTCCAACGTTGATATTGGGTTTTAGAATCTACCTTAATAAGAAAACACC
AATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGG
CTGATGACACCGAGGACTCAAATCAGGAGACTCAGCCAGTTGATACTGATACTTGGCATGATCTTGCCCTAGGTAACCAATGAACCACCTTCTCCTAACTAAGGGTTGTC
TGTTTTCAAGAAACTTGCTTCGAGTTATAAATTTTATTATCAAATTCTCTTGCGGTATTTGTATTGTAGATTGTCATATTTCACTAAAATCCATGTTGTAGAGTTAGGTA
GAAAGTGTTTGTTTGTGGTAAAAGAAATTATGTACATGTTGGTGGCAGTCAGTTAAGACTATTGATGGATTTGCTGTTCTCTTTTGTAATTTGTTGTGTGAAGACAGATT
GAAATGTTATTTCTTATTATGAGATCTTTGTTCAATTCCACTTGGAAAAAACTTTAGAGTTGCTTCTAAACTTAATGGTTTTAAAAGGAG
Protein sequenceShow/hide protein sequence
MVLRVPKAEDTAPVLNFPPQLNLHPSLSSLHARFPRCHSSSSVTHYSLTTHRHSRSLRPLVGDLSQIRLHSVSALRSLTPTLILGFRIYLNKKTPMAELSLGILIDILDE
EWMRDTLPHDDLLLPPVLVVRADDTEDSNQETQPVDTDTWHDLALGNQ