CuGenDBv2

Gene ID	CSPI03G00270
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	Chr3:229653..233440
RNA-Seq Expression	CSPI03G00270
Synteny	CSPI03G00270
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596276.1 hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia]

5.3e-79

88.57

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

XP_004146176.1 uncharacterized protein LOC101204142 [Cucumis sativus]

3.5e-91

100

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

5.0e-85

93.79

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLL+SKVII+IVLVCWFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

XP_023539852.1 uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]

9.0e-79

88.57

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+KEIK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

XP_038904813.1 uncharacterized protein LOC120091071 [Benincasa hispida]

1.2e-78

87.01

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E I+E++SSIAAPFIF IVIGFQFLAKWLEHLKK GSNSQ+EMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNK++KTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLY +VLL+SKV I+I+LVCWFWR SVATVP HLVQPFGKFLSWR GGTVND VKVGI+PWLILSTRVSKFV RVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

1.7e-91

100

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

A0A1S3BKE1 uncharacterized protein LOC103490650

2.4e-85

93.79

Show/hide

Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLL+SKVII+IVLVCWFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

A0A6J1G1T6 uncharacterized protein LOC111449636

1.3e-78

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

A0A6J1I7A9 uncharacterized protein LOC111470261

1.7e-78

87.43

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGG VNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

A0A6J1L884 uncharacterized protein LOC111500212

6.3e-78

87.5

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Query:  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG
        E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG
Subjt:  EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG

Query:  LYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        LYS+VLL+SKV ++I LV WFWR SVATVPHHLVQPFG+ LSW+AGG VNDYVKVGIIPWLILSTRVSKFV +VV+
Subjt:  LYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

3.7e-51

59.32

Show/hide

Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
         +Y + LL SKV+I+++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

2.6e-52

59.32

Show/hide

Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
         +Y + LL SKV+I+++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAA
GAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAAC
TTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCG
AAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGG
AGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

mRNA sequence

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CAACCTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGA
ATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAG
CCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAG
CCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACAT
ATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGA
TTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGA
ATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTT
GTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTAT
TTTTTACTTAGAATTAAGATATTCTATAGATATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGC
TAAAAAAAAAT

Protein sequence

Show/hide protein sequence

MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVS
KVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

CSPI03G00270 (gene) of Cucumber (PI 183967) v1 genome