; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G00570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G00570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr3:413746..414640
RNA-Seq ExpressionCSPI03G00570
SyntenyCSPI03G00570
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052944.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]2.7e-7391.95Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE
        M+FNKVFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVE
Subjt:  MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSME  GGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFHTSGF

KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]1.4e-77100Show/hide
Query:  VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR
        VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR
Subjt:  VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR

Query:  TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]9.1e-6177.93Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF
        M+FNK+FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP+  DDC + ALSS EKALEGETCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWF
Subjt:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF

Query:  EECRRTCPICRYSMEGGG-SHEDETNQILTDEMVIWFSSFHTSGF
        EECRRTCPICRYSMEGGG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSMEGGG-SHEDETNQILTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6077.93Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF
        M+FNK+FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWF
Subjt:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF

Query:  EECRRTCPICRYSMEGGG-SHEDETNQILTDEMVIWFSSFHTSGF
        EECRRTCPICRYSMEGGG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSMEGGG-SHEDETNQILTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]1.1e-6684.93Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVG--TSVLPCLHEFHKVCVER
        M+FNKVFFFFYNN +GFRSR R KQATPLP  GN SLRP+  DDC I+ LSS EKALEGETCCVCLSSMGN D D DKGVG  TSVLPCLHEFHKVCV+R
Subjt:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVG--TSVLPCLHEFHKVCVER

Query:  WFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        WFEECRRTCPICRYSMEGGGSHED TNQILTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein6.5e-81100Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF
        MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF
Subjt:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWF

Query:  EECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        EECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF131.3e-7391.95Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE
        M+FNKVFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEGETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVE
Subjt:  MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVE

Query:  RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSME  GGGSHEDETNQILTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSME--GGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A6A1UIA7 Protein preY, mitochondrial4.3e-2449.64Show/hide
Query:  LIGFRSRPRFKQATPLPRSGNSSLRPLPTD----DCTILA---LSSLEKALEGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR
        LIG R++P  K+A   P S  S +     D    D T+ A    SS  +  EGE  CCVCLS +        KG  T +LPCLHEFHKVCV+RWF  CR+
Subjt:  LIGFRSRPRFKQATPLPRSGNSSLRPLPTD----DCTILA---LSSLEKALEGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR

Query:  TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        TCP+CR+SM  GG       + LTDEMVIWFSSFH +GF
Subjt:  TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like5.8e-4565.54Show/hide
Query:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTI---LALSSLEKALEGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV
        M+FN+VFFFFY N IGFR RP+ KQ T LP  G+S+LR +  D+  I   + LSS  KALEGE  CCVCLSS+       ++G+ TSVLPCLHEFHKVCV
Subjt:  MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTI---LALSSLEKALEGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV

Query:  ERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        +RWFEE RRTCPICRYSMEG G   +   QILTDEMVIWFSSFHTSGF
Subjt:  ERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

A0A7N2R4T7 RING-type domain-containing protein1.6e-2646.98Show/hide
Query:  MIFNKVFFFFYNNLIG----FRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV
        M+F K+  F YN+LIG     R++P F +A  L       L  +  D+  +     +E  +EGE CCVCLS +    + G + + T  LPCLHEFHK+CV
Subjt:  MIFNKVFFFFYNNLIG----FRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV

Query:  ERWFEE-CRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF
        +RWF   CR+TCP+CR+SM  GG  +  T Q+LTDEMVIWFSSFH +GF
Subjt:  ERWFEE-CRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
Q5XIL0 E3 ubiquitin-protein ligase RNF1671.1e-0831.25Show/hide
Query:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ
        R     L+ +PT D         +K  E + C +CL        DGDK     +LPC H +H  CV+ W  + R+TCPIC+  +  G   E++  +
Subjt:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ

Q8BP31 RING finger protein 1227.8e-0737.66Show/hide
Query:  LEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMV
        L G+TC VCL      D  G       VLPC H FH+ C+ +W  E R  CP+C   +  G +   ++  IL DE+V
Subjt:  LEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMV

Q91XF4 E3 ubiquitin-protein ligase RNF1674.9e-0931.68Show/hide
Query:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTD
        R     L+ +PT D         +K  E + C +CL        DGDK     VLPC H +H  CV+ W  + R+TCPIC+  +  G   E++  +    
Subjt:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTD

Query:  E
        E
Subjt:  E

Q9H6Y7 E3 ubiquitin-protein ligase RNF1676.4e-0932.29Show/hide
Query:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ
        R     L+ +PT D         +K  + + C +CL        DGDK     VLPC H +H  CV+ W  + R+TCPIC+  +  G   ED+  +
Subjt:  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ

Q9M2S6 E3 ubiquitin-protein ligase SDIR16.0e-0728.57Show/hide
Query:  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN
        P +G S  +   T       L S  ++ +G     TC VCL  +         G     LPCLH+FH  C++ W  + + TCP+C++    G   +DE +
Subjt:  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN

Query:  QILTD
           +D
Subjt:  QILTD

Arabidopsis top hitse value%identityAlignment
AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein1.2e-0732.31Show/hide
Query:  LEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG
        LE++    TC +C+        D   G    +LPC H++H VC++ W   CR  CP+C+ +   G
Subjt:  LEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG

AT3G51325.1 RING/U-box superfamily protein9.8e-1342.86Show/hide
Query:  EGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFH
        E E C VCL  M   D           LPC HEFH +CV+ WF   R+  CP+CR+S          T  +LTDE+++WFSSFH
Subjt:  EGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFH

AT3G55530.1 RING/U-box superfamily protein4.3e-0828.57Show/hide
Query:  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN
        P +G S  +   T       L S  ++ +G     TC VCL  +         G     LPCLH+FH  C++ W  + + TCP+C++    G   +DE +
Subjt:  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN

Query:  QILTD
           +D
Subjt:  QILTD

AT4G32600.1 RING/U-box superfamily protein7.3e-0837.97Show/hide
Query:  EKALEGE--TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ-ILT
        E+A+ GE   CC+CL+   N +           LPC H FHK CV++W  +   +CP+C+   E G  + D T+Q ILT
Subjt:  EKALEGE--TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ-ILT

AT5G45290.1 RING/U-box superfamily protein7.3e-0834.67Show/hide
Query:  PLPTD--DCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICR
        P P D  D   + L +  ++ +   C +CL      D           LPC HEFHK CV++W +E  R CP+CR
Subjt:  PLPTD--DCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACCTCATTGGCTTCCGGAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCCCGCAGTGGCAATTCGAGCCT
TCGACCTTTGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGCCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACA
GGGATGGAGATAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTGGAACGGTGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGT
CGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCATACCTCTGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGTAACTCTCTTGTTTAGGTAGCAACCGCTTTGTGTATGACTCATTACTATCCTTCTTCTTCACCAATCCAACCACTTCTAACCCACGCAAGAATTGCTCTCTTTTTC
TCCTCTAATCTCATCTTCCTTTTCATTAAAAAAAAAAAAAAAACATCTCTAGCTAGCTAATGACTTCCAAATCTCTTCATTGATGACAAATAATGATTTTCAACAAGGTC
TTCTTCTTCTTCTACAACAACCTCATTGGCTTCCGGAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCCCGCAGTGGCAATTCGAGCCTTCGACCTTTGCCAACTGA
TGATTGTACTATCTTAGCTCTTTCGAGCCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGATAAGGGTG
TTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTGGAACGGTGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGA
GGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCATACCTCTGGTTTTTGAGCTGTTTTGATTTGTTAGTTACA
TCTACTAAAAGCTTTCAAGCTTTTGCAAAAGTGCTTCCTTTGTACAAGGTTAAATCTTCATGATTTTGATTAATGTCATTTGGATGGCTCTAGCTTCACAATATCACTGT
TGAGAATATCTTTTTTTCCGTTTAAAAATAAAGTTAGTCTGTAGAAAAGAAGTGGAACCATTCAAATTTATGTCTAATCTCTAATGTTGTGGGAAAAGGGAAAAATTCAT
AATTAGATAAAGTAC
Protein sequenceShow/hide protein sequence
MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPIC
RYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF