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CSPI03G01670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G01670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr3:1182729..1183490
RNA-Seq ExpressionCSPI03G01670
SyntenyCSPI03G01670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650028.1 hypothetical protein Csa_011525 [Cucumis sativus]1.2e-5096.36Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR----GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD
        MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR    GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR----GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD

Query:  WSFEDLRAIR
        WSFEDLRAIR
Subjt:  WSFEDLRAIR

XP_008448684.1 PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo]2.5e-4582.61Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG        FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE

Query:  DLRAIREEKQPSPNS
        DLR IREEK+PSPNS
Subjt:  DLRAIREEKQPSPNS

XP_023539506.1 uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]3.2e-2460.98Show/hide
Query:  MSLNCLSCQI-LQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSG
        MSLNCLSCQ+ LQR+DS+  +D +   Y+T D+  S +RSWSGNL  RP           GFR   +NKVAP GHRR     AV+FG  GKEPRLIRS+G
Subjt:  MSLNCLSCQI-LQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSG

Query:  MRRDWSFEDLRAIREEKQPSPNS
        MRRDWSFEDLRAIREEK+ SPNS
Subjt:  MRRDWSFEDLRAIREEKQPSPNS

XP_031737872.1 uncharacterized protein LOC116402546 [Cucumis sativus]4.1e-5696.64Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR----GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD
        MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR    GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNR----GGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRD

Query:  WSFEDLRAIREEKQPSPNS
        WSFEDLRAIREEKQPSPNS
Subjt:  WSFEDLRAIREEKQPSPNS

XP_038905810.1 uncharacterized protein LOC120091761 [Benincasa hispida]1.4e-4078.57Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
        MSLNCLSCQILQRTDSERHRD+Q+QTYY SDEF+SSERSWSGNL  RP+     G    GFRG+ +NKVAPI HRRAVSFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE

Query:  DLRAIREEKQPS
        DLR IREE++PS
Subjt:  DLRAIREEKQPS

TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein3.6e-58100Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
        MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE

Query:  DLRAIREEKQPSPNS
        DLRAIREEKQPSPNS
Subjt:  DLRAIREEKQPSPNS

A0A1S3BJN6 uncharacterized protein LOC1034907831.2e-4582.61Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG        FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE

Query:  DLRAIREEKQPSPNS
        DLR IREEK+PSPNS
Subjt:  DLRAIREEKQPSPNS

A0A5A7UAS3 Uncharacterized protein1.2e-4582.61Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE
        MSLNCLSCQ+LQRTDSERHRDRQ+QTYYTSDEF+ S+RSWSGNL LR NRGG        FRGMADNKVAP+ HRRAVSFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFE

Query:  DLRAIREEKQPSPNS
        DLR IREEK+PSPNS
Subjt:  DLRAIREEKQPSPNS

A0A6J1GL99 uncharacterized protein LOC1114549682.0e-2460.16Show/hide
Query:  MSLNCLSCQI-LQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSG
        MSLNCLSCQ+ LQR+DS+  +D +   Y+T D+  S +RSWSGNL  RP           GFR   +NKVAP+GHRR     AV+FG  GKEPRLIRS+G
Subjt:  MSLNCLSCQI-LQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFG--GKEPRLIRSSG

Query:  MRRDWSFEDLRAIREEKQPSPNS
        MRRDWSFEDLRAIRE+K+ SPNS
Subjt:  MRRDWSFEDLRAIREEKQPSPNS

A0A6J1L834 uncharacterized protein LOC1115001861.0e-2055.26Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFGGKEPRLIRSSGMRR
        M+LNCLSCQ+LQRTDSER  D Q+Q YY S +   S RSWSGNL  RP             R + +++  P+  RR      +S G KEP+L+RSSGMRR
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRR-----AVSFGGKEPRLIRSSGMRR

Query:  DWSFEDLRAIREEK
        DWSFEDLRAIREEK
Subjt:  DWSFEDLRAIREEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein3.1e-0937.29Show/hide
Query:  MSLNCLSCQILQRTDSER----HRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVS-----FGG-KEPRLIRS
        MSLNCL+C ILQRTDS+R     +D   +  + +  F    R+ S    +R                   NK    GHRR  S     +G   EP+L+RS
Subjt:  MSLNCLSCQILQRTDSER----HRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVS-----FGG-KEPRLIRS

Query:  SGMRRDWSFEDLRAIREE
        SG+RRDWSFEDL+  +++
Subjt:  SGMRRDWSFEDLRAIREE

AT5G46770.1 unknown protein5.4e-0634.88Show/hide
Query:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFN----------SSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKV------APIGHRRA-VSFGGK
        MSLNCLSCQ L RTDS +  D         +  N             R+WSGNL  R     G  G     +     K+       P+G   + V    +
Subjt:  MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFN----------SSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKV------APIGHRRA-VSFGGK

Query:  EPRLIRSSGMRRDWSFEDLR--AIREEKQ
        +P+L+RS+G+RR+WSFE+LR   + EEK+
Subjt:  EPRLIRSSGMRRDWSFEDLR--AIREEKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGAATTGCCTCTCCTGTCAAATCCTACAGAGAACGGATTCCGAGAGACACCGTGACCGGCAGGTCCAAACTTACTATACCTCCGATGAGTTCAATTCCTCGGA
GAGAAGCTGGTCGGGGAACCTCTGTCTCCGTCCAAACAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGTTTCGGGGCATGGCGGACAACAAGGTGGCTCCGATCGGTC
ACCGCCGTGCCGTATCGTTCGGGGGGAAGGAGCCGAGATTGATTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCTATTCGTGAGGAAAAGCAA
CCTTCTCCCAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ACATATTTAGATGAAAATGATGATCAAACAAAGAAGAAGAAAAAGTAATTAATGAAATAAATAAAGGGGAGATTAAAAGGGAAATGAAAGAATGAATAGAAATGGTTAGA
AATAGGATTAGAATTAATAATCCTTATCCCAATAAAAGAAAGAAACCCTAAAATTAGAGAGTGGTAGTTAACCAAAAAATCCGTACAACCAAAAAACGAAAAATCCCCAA
ATTTAAAACCCTAAAAATTTCATTTCATGAAATCAATCCCCACAAAATCTTTAATCTCTCTCTCTCTCTCTCTTTCTCCCGTGTCTTCTTCAACCATCAATCATGAGTTT
GAATTGCCTCTCCTGTCAAATCCTACAGAGAACGGATTCCGAGAGACACCGTGACCGGCAGGTCCAAACTTACTATACCTCCGATGAGTTCAATTCCTCGGAGAGAAGCT
GGTCGGGGAACCTCTGTCTCCGTCCAAACAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGTTTCGGGGCATGGCGGACAACAAGGTGGCTCCGATCGGTCACCGCCGT
GCCGTATCGTTCGGGGGGAAGGAGCCGAGATTGATTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTCAGAGCTATTCGTGAGGAAAAGCAACCTTCTCC
CAATTCCTAACTTTCAATTAACCTTTTCTTTTATTTCTTCTTTTCATTTTATTTAATCATTATTTGAACATGAATATATATATTAATATATATTAATATATA
Protein sequenceShow/hide protein sequence
MSLNCLSCQILQRTDSERHRDRQVQTYYTSDEFNSSERSWSGNLCLRPNRGGGGGGGGRGFRGMADNKVAPIGHRRAVSFGGKEPRLIRSSGMRRDWSFEDLRAIREEKQ
PSPNS