; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI03G02250 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G02250
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein lingerer like
Genome locationChr3:1698977..1700515
RNA-Seq ExpressionCSPI03G02250
SyntenyCSPI03G02250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030163.1 hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4864.29Show/hide
Query:  ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTS
        A VS+ENKVLV+VY+E+QEPR+ VNR QRD+VNK VRNQWK++ ANKGYNRRTELLKYSQRLRKSA+SPASPY+ TPEPI                    
Subjt:  ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTS

Query:  FSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
         SLVNL  KPKG RFTSCFGNLIQRS KALTSFQPK  RQ QNQSSGSTK  N+ K                RIRLL FTCT
Subjt:  FSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

XP_008448775.1 PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo]1.1e-9097.27Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQR NVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
        SFSLVNLCGKPKGPRFTSCFGNLIQRSYKAL SFQPKKDRQKQNQSSGSTK VNEVKNSESKSKNT+DKVKG RIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

XP_008448776.1 PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo]5.1e-8593.99Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQR NVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL   
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
           LVNLCGKPKGPRFTSCFGNLIQRSYKAL SFQPKKDRQKQNQSSGSTK VNEVKNSESKSKNT+DKVKG RIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

XP_011650374.1 uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus]7.9e-94100Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
        SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

XP_011650375.1 uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus]3.8e-8896.72Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL   
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
           LVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

TrEMBL top hitse value%identityAlignment
A0A061GAZ6 Uncharacterized protein4.9e-0938.37Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPV-NRYQRDNVNKVVRNQWKQDT-----ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIA
        MAT  K+  VLVTVY+EK  PR  V + +Q    +  + +  KQ+      A KGYNRR ELL YSQRLR+SARS AS  +++ +P+   ++Q       
Subjt:  MATVSKENKVLVTVYSEKQEPRLPV-NRYQRDNVNKVVRNQWKQDT-----ANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIA

Query:  INLVCTSFSLVNLCGKPKGPRFTSCFGN---LIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKS
              S  +V++  KPK  R  +CF N   LI R  ++LT+ Q KK  +K+ Q  GST + + +  +  KS
Subjt:  INLVCTSFSLVNLCGKPKGPRFTSCFGN---LIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKS

A0A0A0L6R0 Uncharacterized protein2.2e-8696.59Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIR
        SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDK+   + R
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIR

A0A1S3BKH3 uncharacterized protein LOC103490841 isoform X15.2e-9197.27Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQR NVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
        SFSLVNLCGKPKGPRFTSCFGNLIQRSYKAL SFQPKKDRQKQNQSSGSTK VNEVKNSESKSKNT+DKVKG RIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

A0A1S3BL45 uncharacterized protein LOC103490841 isoform X22.5e-8593.99Show/hide
Query:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT
        MATVSKENKVLVTVYSEKQEPRLPVNRYQR NVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINL   
Subjt:  MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCT

Query:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT
           LVNLCGKPKGPRFTSCFGNLIQRSYKAL SFQPKKDRQKQNQSSGSTK VNEVKNSESKSKNT+DKVKG RIRLLTFTCT
Subjt:  SFSLVNLCGKPKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT

A0A5A7TG76 Uncharacterized protein2.1e-4799.03Show/hide
Query:  ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTS
        ATVSKENKVLVTVYSEKQEPRLPVNRYQR NVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTS
Subjt:  ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTS

Query:  FSL
        FSL
Subjt:  FSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAGTATCAAAAGAGAATAAAGTGTTGGTGACTGTGTATTCGGAGAAGCAAGAACCAAGACTACCAGTCAATCGCTATCAACGCGATAACGTGAATAAAGTAGT
TAGAAATCAATGGAAGCAAGACACGGCTAATAAAGGATACAATAGGAGAACTGAACTCCTCAAGTACTCTCAACGCCTTCGTAAGTCTGCACGGTCACCCGCATCTCCAT
ATATCCGAACACCAGAGCCAATTCCTTTGAAGAACAAACAACCAATTGCAAGAAGCATAGCAATTAATCTTGTATGCACTTCCTTTTCTCTCGTCAATCTTTGTGGAAAG
CCCAAGGGTCCCAGATTTACAAGTTGTTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTTCAACCAAAGAAAGATAGGCAAAAGCAGAACCAAAGCAG
TGGATCTACCAAGAAGGTTAATGAAGTAAAAAACAGTGAATCAAAGAGCAAGAATACCATGGATAAAGTAAAGGGCAGTAGGATAAGACTACTGACATTTACATGTACCT
GA
mRNA sequenceShow/hide mRNA sequence
CGCAATCACATATCCAAACATCAATTTTGTGCCTAATCCCTTGTTCCATCCTTTCTCTGTTTGGTGGAGAAATGAAAAAAACTGCAAATTAAAAGTTGAAGAATGGAAGA
TGAATTTACCATCTTGTGTATATATCTCATTGTATGCATCACCACCGTAAAATATTGTATATTATCACTTTGTAGGTATCACCACAAATCTTTATACACATAAAATATAC
ACACGCAAGGTGACACATACAAGGTGATATAGGAAGATACATATATAGTAATATATCCATCCATCCGTAGCTATCTACATCCATTTATACAAGTTATATAATTTCAATAT
CTCGTAAATATATCCAGGGAAAGAAGACTTACAGATCATAATCCCATCTTGTCAACTTAAATGGCAACAGTATCAAAAGAGAATAAAGTGTTGGTGACTGTGTATTCGGA
GAAGCAAGAACCAAGACTACCAGTCAATCGCTATCAACGCGATAACGTGAATAAAGTAGTTAGAAATCAATGGAAGCAAGACACGGCTAATAAAGGATACAATAGGAGAA
CTGAACTCCTCAAGTACTCTCAACGCCTTCGTAAGTCTGCACGGTCACCCGCATCTCCATATATCCGAACACCAGAGCCAATTCCTTTGAAGAACAAACAACCAATTGCA
AGAAGCATAGCAATTAATCTTGTATGCACTTCCTTTTCTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTCCCAGATTTACAAGTTGTTTCGGCAACCTGATTCAAAGGTC
TTACAAAGCTTTGACAAGTTTTCAACCAAAGAAAGATAGGCAAAAGCAGAACCAAAGCAGTGGATCTACCAAGAAGGTTAATGAAGTAAAAAACAGTGAATCAAAGAGCA
AGAATACCATGGATAAAGTAAAGGGCAGTAGGATAAGACTACTGACATTTACATGTACCTGATTTTATAGATCTCCATTAAATTTATCTGGATGTATGCCCCAAATTCCT
CACTTGACTTTCTTTCAAAGGCAATAGAAGTGAGGTCACCCCCTCTTCTCGTTCAATATTTAAATGATCCACTAATTGCTATTTTAAACACACAAAAAAAAG
Protein sequenceShow/hide protein sequence
MATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGK
PKGPRFTSCFGNLIQRSYKALTSFQPKKDRQKQNQSSGSTKKVNEVKNSESKSKNTMDKVKGSRIRLLTFTCT